ggKbase home page

13_1_40cm_3_scaffold_1861

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1861_1
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..424
DNA (423bp) protein (141aa)
chorismate synthase; K01736 chorismate synthase [EC:4.2.3.5] Tax=GWC2_Pelobacteraceae_58_13_curated
chorismate synthase (EC:4.2.3.5)
Chorismate synthase id=4661327 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_3_scaffold_1861_2
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

424..2016
DNA (1593bp) protein (531aa)
3-dehydroquinate synthase; K13829 shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
aroB-aroK; bifunctional 3-dehydroquinate synthase/shikimate kinase (EC:2.7.1.71 4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=24447243 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
aroK_aroB; shikimate kinase
13_1_40cm_3_scaffold_1861_3
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2013..2504
DNA (492bp) protein (164aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002FB46E1
13_1_40cm_3_scaffold_1861_4
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

2501..3058
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCQ1_THET1
translation elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-7
13_1_40cm_3_scaffold_1861_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

3051..4310
DNA (1260bp) protein (420aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit id=3825079 bin=GWC2_Chloroflexi_73_18 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
exodeoxyribonuclease VII large subunit Tax=GWC2_RIF_CHLX_73_18_curated
13_1_40cm_3_scaffold_1861_6
R_OP11_Curtissbacteria_41_18, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

4303..4527
DNA (225bp) protein (75aa)
xseB; putative exodeoxyribonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_01_FULL_OP11_Curtissbacteria_41_18_curated
13_1_40cm_3_scaffold_1861_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4649..5530)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI000379D5DC
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
alpha/beta hydrolase fold protein
13_1_40cm_3_scaffold_1861_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5562..6344
DNA (783bp) protein (261aa)
hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Hemolysin A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A17_SOLUE
hemolysin A
13_1_40cm_3_scaffold_1861_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6341..7168
DNA (828bp) protein (276aa)
inorganic polyphosphate/ATP-NAD kinase; K00858 NAD+ kinase [EC:2.7.1.23] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DM03_9FIRM
inorganic polyphosphate/ATP-NAD kinase
13_1_40cm_3_scaffold_1861_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7165..7971
DNA (807bp) protein (269aa)
purine nucleoside phosphorylase (EC:2.4.2.1); K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67R72_SYMTH
13_1_40cm_3_scaffold_1861_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7971..9341
DNA (1371bp) protein (457aa)
pdp; pyrimidine nucleoside phosphorylase (EC:2.4.2.2) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY82_ANATU
13_1_40cm_3_scaffold_1861_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9505..10020
DNA (516bp) protein (172aa)
metal-dependent protease Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptidase M50 id=24428361 bin=RBG_19FT_COMBO_GAL15_69_19 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase M50
Displaying 12 items

View Taxonomy