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13_1_40cm_3_scaffold_1215

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1215_1
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..762)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0B0_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI62132.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola
13_1_40cm_3_scaffold_1215_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(891..1646)
DNA (756bp) protein (252aa)
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RBG_16_Archaea_50_20_curated
PRPP-binding protein, adenine/guanine phosphoribosyltransferase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8W6_9ARCH
adenine phosphoribosyltransferase
13_1_40cm_3_scaffold_1215_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2301..2903
DNA (603bp) protein (201aa)
Putative DNA-3-methyladenine glycosylase II n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFH7_NITGG
DNA-3-methyladenine glycosylase II
Putative DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:AFU57583.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sou
13_1_40cm_3_scaffold_1215_4
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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3008..3796
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LZK1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69488.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
peptidase M48 Ste24p
13_1_40cm_3_scaffold_1215_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3805..4974)
DNA (1170bp) protein (390aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFM2_ALKOO
acyl-CoA dehydrogenase domain-containing protein Tax=RBG_16_Euryarchaeota_41_19_curated
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_3_scaffold_1215_6
unknown

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5148..6707
DNA (1560bp) protein (520aa)

This feature has no annotations

13_1_40cm_3_scaffold_1215_7

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6893..8386
DNA (1494bp) protein (498aa)
Predicted ATPase n=1 Tax=uncultured archaeon GZfos18C8 RepID=Q64DG8_9ARCH
Predicted ATPase {ECO:0000313|EMBL:AAU82559.1}; TaxID=285411 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos18C8.;"
13_1_40cm_3_scaffold_1215_8
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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8548..9699
DNA (1152bp) protein (384aa)
Acetyl-CoA acetyltransferase (EC:2.3.1.9)
3-ketoacyl-CoA thiolase (AcaB-10) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29294_ARCFU
Acetyl-CoA acetyltransferase Tax=RBG_16_Armatimonadetes_67_12_curated
13_1_40cm_3_scaffold_1215_9
RBG_16_Archaea_50_20_curated, Archaea

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9712..10872
DNA (1161bp) protein (387aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RBG_16_Archaea_50_20_curated
acaB-9; acetyl-CoA acetyltransferase (EC:2.3.1.9)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MRQ4_9BACT
13_1_40cm_3_scaffold_1215_10
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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10882..11397
DNA (516bp) protein (172aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BD85_9EURY
putative nucleic-acid-binding protein containing a Zn-ribbon
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:AGK60207.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus
13_1_40cm_3_scaffold_1215_11

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11401..11817
DNA (417bp) protein (139aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SHD5_9BACT
Marine sediment metagenome DNA, contig: S01H4_C00434 {ECO:0000313|EMBL:GAG72295.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative nucleic-acid-binding protein
13_1_40cm_3_scaffold_1215_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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12782..13333
DNA (552bp) protein (184aa)
Acetyltransferase n=2 Tax=Haloarcula hispanica RepID=G0HQK6_HALHT
acetyltransferase, ribosomal protein N-acetylase Tax=RBG_13_Bathyarchaeota_46_16b_curated
acetyltransferase
13_1_40cm_3_scaffold_1215_13
unknown

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comp(13873..14355)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_3_scaffold_1215_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(14495..15193)
DNA (699bp) protein (233aa)
putative Micrococcal nuclease (EC:3.1.31.1)
Nuclease-like protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EJY8_9ARCH
excalibur domain-containing protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_3_scaffold_1215_15
unknown

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comp(15844..16062)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_3_scaffold_1215_16
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(16415..16942)
DNA (528bp) protein (176aa)
Marine sediment metagenome DNA, contig: S01H1_S41057 Tax=RBG_13_Bathyarchaeota_52_12_curated
13_1_40cm_3_scaffold_1215_17
unknown

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17452..17946
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_3_scaffold_1215_18
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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18103..18339
DNA (237bp) protein (79aa)
AbrB family transcriptional regulator protein Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_1215_19
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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18336..18740
DNA (405bp) protein (135aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_1215_20
unknown

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19484..20215
DNA (732bp) protein (244aa)

This feature has no annotations

13_1_40cm_3_scaffold_1215_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(21089..21652)
DNA (564bp) protein (188aa)
putative Micrococcal nuclease (EC:3.1.31.1)
micrococcal nuclease-like protein (EC:3.1.31.1) id=14427539 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
excalibur domain-containing protein Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 21 items

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