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13_1_40cm_3_scaffold_220

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_220_1
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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200..829
DNA (630bp) protein (210aa)
O-methyltransferase family protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRI1_9BACT
O-methyltransferase family protein {ECO:0000313|EMBL:BAL58698.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
O-methyltransferase
13_1_40cm_3_scaffold_220_2
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1005..3704
DNA (2700bp) protein (900aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
mxa:MXAN_2925 vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=99496 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ribonucleoside-diphosphate reductase class II (EC:1.17.4.1)
13_1_40cm_3_scaffold_220_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3943..5172
DNA (1230bp) protein (410aa)
Seroreactive antigen BMN1-5 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CUM5_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC17016.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_3_scaffold_220_4
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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5185..5463
DNA (279bp) protein (93aa)
Putative transcriptional regulator n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8T8_9ARCH
Putative transcriptional regulator Tax=RBG_13_Bathyarchaeota_52_12_curated
13_1_40cm_3_scaffold_220_5
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5572..6336
DNA (765bp) protein (255aa)
Aminoglycoside nucleotidyltransferase n=2 Tax=Meiothermus RepID=D3PND8_MEIRD
aminoglycoside nucleotidyltransferase
Aminoglycoside nucleotidyltransferase {ECO:0000313|EMBL:ADH62472.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus
13_1_40cm_3_scaffold_220_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6351..6986)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMU3_NITGG
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_220_7
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7262..7837)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI000304E91D
Beta-lactamase superfamily domain
Metal-dependent hydrolase {ECO:0000313|EMBL:EZP76785.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB3621.;"
13_1_40cm_3_scaffold_220_8
unknown

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comp(8185..9018)
DNA (834bp) protein (278aa)

This feature has no annotations

13_1_40cm_3_scaffold_220_9
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9032..9451)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6CI70_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EKN70860.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
thioesterase superfamily protein
13_1_40cm_3_scaffold_220_10
unknown

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9632..9886
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_3_scaffold_220_11
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(9911..11365)
DNA (1455bp) protein (485aa)
Putative amino acid permease n=2 Tax=Leptospirillum sp. Group II RepID=A3EU54_9BACT rbh
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AIA31048.1}; TaxID=1441628 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum YSK.;"
13_1_40cm_3_scaffold_220_12
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(11453..12211)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI000367F792
mscs mechanosensitive ion channel Tax=RBG_16_Thaumarchaeota_49_8_curated
small conductance mechanosensitive ion channel, MscS family
13_1_40cm_3_scaffold_220_13
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12238..12873)
DNA (636bp) protein (212aa)
TrkA N-terminal domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CN49_9CLOT
TrkA N-terminal domain protein {ECO:0000313|EMBL:CDA78123.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clos
TrkA domain-containing protein
13_1_40cm_3_scaffold_220_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

13106..13534
DNA (429bp) protein (143aa)
Histidine triad protein n=2 Tax=Crenarchaeota RepID=H5SVY5_9CREN
histidine triad nucleotide-binding protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Thaumarchaeota_49_8_curated
HIT family hydrolase, diadenosine tetraphosphate hydrolase
13_1_40cm_3_scaffold_220_15
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(13594..14298)
DNA (705bp) protein (235aa)
Endonuclease III n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6P1_METSW
endonuclease III Tax=RBG_16_Thaumarchaeota_49_8_curated
HhH-GPD family protein
13_1_40cm_3_scaffold_220_16
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14295..15134)
DNA (840bp) protein (280aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJR7_METFS rbh
apurinic endonuclease APN1
13_1_40cm_3_scaffold_220_17
unknown

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comp(15226..15543)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_3_scaffold_220_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(15779..16981)
DNA (1203bp) protein (401aa)
Transporter, major facilitator family protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0U0_9ARCH
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AIF84826.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_3_scaffold_220_19
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(17027..17635)
DNA (609bp) protein (203aa)
Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A5M7_THECD
putative transcriptional regulator Tax=CG_Dehalo_02
PadR-like family transcriptional regulator
13_1_40cm_3_scaffold_220_20
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

17707..18186
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LTB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB67894.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
hypothetical protein
13_1_40cm_3_scaffold_220_21

Not on your lists

18416..19120
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1BUI5_9ZZZZ
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49146.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_3_scaffold_220_trna_1
unknown

Not on your lists

19201..19300
DNA (100bp)
transferRNA
13_1_40cm_3_scaffold_220_22
unknown

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comp(19308..20219)
DNA (912bp) protein (304aa)

This feature has no annotations

13_1_40cm_3_scaffold_220_23
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

20530..21501
DNA (972bp) protein (324aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE86880.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
Putative uncharacterized protein id=4530966 bin=GWA2_Elusi_like_61_42 species=Pseudoalteromonas tunicata genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
13_1_40cm_3_scaffold_220_trna_2
unknown

Not on your lists

21599..21689
DNA (91bp)
transferRNA
13_1_40cm_3_scaffold_220_24
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21780..22259)
DNA (480bp) protein (160aa)
GCN5-related N-acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U437_9CHLR
Acetyltransferase domain protein {ECO:0000313|EMBL:KFM83818.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacil
GNAT family acetyltransferase
13_1_40cm_3_scaffold_220_25
unknown

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22438..22599
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_3_scaffold_220_26
unknown

Not on your lists

22741..22908
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_3_scaffold_220_27
unknown

Not on your lists

22957..23274
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying 29 items

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