ggKbase home page

13_1_40cm_3_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_23_1
unknown

Not on your lists

1..147
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

147..1190
DNA (1044bp) protein (348aa)
Luciferase family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YC8_SOLUE
putative FMN-dependent luciferase-like monooxygenase family protein
Putative FMN-dependent luciferase-like monooxygenase family protein {ECO:0000313|EMBL:AIC16670.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae
13_1_40cm_3_scaffold_23_3
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1454..2119
DNA (666bp) protein (222aa)
Putative acetyltransferase n=1 Tax=Gordonia aichiensis NBRC 108223 RepID=L7KLZ5_9ACTO
Putative acetyltransferase {ECO:0000313|EMBL:GAC49501.1}; TaxID=1220583 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108223.;"
GCN5 family acetyltransferase
13_1_40cm_3_scaffold_23_4
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2405..3739
DNA (1335bp) protein (445aa)
Isocitrate lyase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RW8_SYMTH
isocitrate lyase
Isocitrate lyase {ECO:0000313|EMBL:BAD39575.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (stra
13_1_40cm_3_scaffold_23_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

3757..5379
DNA (1623bp) protein (541aa)
malate synthase A (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
malate synthase A (EC:2.3.3.9)
Malate synthase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WWP1_KYRT2
13_1_40cm_3_scaffold_23_6
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

6205..6690
DNA (486bp) protein (162aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
DNA-3-methyladenine glycosylase I n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK42_9BACT
tag; 3-methyladenine DNA glycosylase
13_1_40cm_3_scaffold_23_7
unknown

Not on your lists

6948..7301
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_8
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

comp(7831..8136)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L7C7_KORCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB08356.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
13_1_40cm_3_scaffold_23_9
unknown

Not on your lists

8621..8911
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_10
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9611..11599
DNA (1989bp) protein (663aa)
pyrrolo-quinoline quinone n=1 Tax=Salisaeta longa RepID=UPI0003B32839
PQQ repeat protein
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ADN35900.1}; Flags: Precursor;; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" so
13_1_40cm_3_scaffold_23_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

12372..13502
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9Z1_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_23_12
unknown

Not on your lists

13511..13921
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_13
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13971..14876)
DNA (906bp) protein (302aa)
methionine aminopeptidase, type II (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_Bathyarchaeota_57_9_curated
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA9_NITGG
13_1_40cm_3_scaffold_23_14

Not on your lists

comp(14941..16095)
DNA (1155bp) protein (385aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=115547 species="Archaea;
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=uncultured archaeon RepID=G3C972_9ARCH
13_1_40cm_3_scaffold_23_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(16474..18015)
DNA (1542bp) protein (514aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RBG_16_Archaea_50_20_curated
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermococcus sp. CL1 RepID=I3ZS66_9EURY
13_1_40cm_3_scaffold_23_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(18155..19663)
DNA (1509bp) protein (503aa)
phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RBG_16_Archaea_50_20_curated
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJ36_THEBM
phenylalanyl-tRNA synthetase subunit alpha
13_1_40cm_3_scaffold_23_17
unknown

Not on your lists

19845..20057
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_18
uncultured crenarchaeote 57a5, Crenarchaeota, Archaea

Not on your lists

comp(20070..21728)
DNA (1659bp) protein (553aa)
Nitroreductase related protein n=1 Tax=uncultured crenarchaeote 57a5 RepID=D4N734_9CREN
Nitroreductase related protein {ECO:0000313|EMBL:ACY24520.1}; TaxID=684058 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 57a5.;"
hypothetical protein
13_1_40cm_3_scaffold_23_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(22499..23758)
DNA (1260bp) protein (420aa)
deaD; DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] Tax=RBG_16_Archaea_50_20_curated
cshA_3; DEAD-box ATP-dependent RNA helicase CshA (EC:3.6.4.13)
RNA helicase n=1 Tax=Brevibacillus laterosporus PE36 RepID=U4WQH5_BRELA
13_1_40cm_3_scaffold_23_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

23895..24659
DNA (765bp) protein (255aa)
Dienelactone hydrolase-like enzyme id=3355364 bin=GWC2_Methylomirabilis_70_16 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dienelactone hydrolase-like enzyme Tax=CSP1_6_Rokubacteria
dienelactone hydrolase-like enzyme
13_1_40cm_3_scaffold_23_21
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24672..24965
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX04407.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Putative uncharacterized protein id=1940965 bin=GWD2_Deltaproteobacteria_55_8 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_3_scaffold_23_22
unknown

Not on your lists

comp(25041..25355)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_23
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(25511..28774)
DNA (3264bp) protein (1088aa)
Predicted hydrolases or acyltransferases Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
13_1_40cm_3_scaffold_23_24
unknown

Not on your lists

29029..29163
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_25
unknown

Not on your lists

29453..29635
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_26
unknown

Not on your lists

29660..29761
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_27
unknown

Not on your lists

30051..30596
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_40cm_3_scaffold_23_28
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

30895..32940
DNA (2046bp) protein (682aa)
cell surface protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B612A2
fibronectin type III domain-containing protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
13_1_40cm_3_scaffold_23_29
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(33017..34270)
DNA (1254bp) protein (418aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBT5_9BACT rbh
Hypothetical conserved protein {ECO:0000313|EMBL:BAL53621.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
protease
13_1_40cm_3_scaffold_23_30
unknown

Not on your lists

comp(34561..35115)
DNA (555bp) protein (185aa)

This feature has no annotations

Displaying items 1-30 of 64 in total

View Taxonomy