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13_1_40cm_3_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5_1
unknown

Not on your lists

458..724
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_3_scaffold_5_2
unknown

Not on your lists

761..886
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_3_scaffold_5_3
unknown

Not on your lists

comp(1059..1490)
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_40cm_3_scaffold_5_4
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(2126..2557)
DNA (432bp) protein (144aa)
Small heat shock protein HSP20 n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XSD3_9CREN
small heat shock protein HSP20
Heat shock protein Hsp20 {ECO:0000313|EMBL:EWG06909.1}; Heat-shock protein Hsp20 {ECO:0000313|EMBL:KJR79548.1}; TaxID=1326980 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; unclassified
13_1_40cm_3_scaffold_5_5
Aeropyrum pernix, Aeropyrum, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(2722..3219)
DNA (498bp) protein (166aa)
50S ribosomal protein L30P n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL30_AERPE
rpl30p; 50S ribosomal protein L30
50S ribosomal protein L30P {ECO:0000255|HAMAP-Rule:MF_01371}; TaxID=272557 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.;" source="Aeropyrum pernix (
13_1_40cm_3_scaffold_5_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(3223..3717)
DNA (495bp) protein (165aa)
30S ribosomal protein S5 n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8C7_9ARCH
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Bathyarchaeota_48_13_curated
rps5p; 30S ribosomal protein S5P
13_1_40cm_3_scaffold_5_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(3818..4420)
DNA (603bp) protein (201aa)
50S ribosomal protein L18P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD8_METFV
rpl18p; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L18
13_1_40cm_3_scaffold_5_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


comp(4424..4852)
DNA (429bp) protein (143aa)
50S ribosomal protein L19e n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KST3_ARCVS
50S ribosomal protein L19
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_3_scaffold_5_9
Thermoproteus tenax, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(4849..5340)
DNA (492bp) protein (164aa)
50S ribosomal protein L32e n=1 Tax=Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) RepID=G4RLJ7_THETK
rpl32e; putative 50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000256|HAMAP-Rule:MF_00810}; TaxID=768679 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus tena
13_1_40cm_3_scaffold_5_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


comp(5398..5976)
DNA (579bp) protein (193aa)
50S ribosomal protein L6 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFW1_PYRYC
50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L6P
13_1_40cm_3_scaffold_5_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(5989..6372)
DNA (384bp) protein (128aa)
30S ribosomal protein S8 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP1_9CREN
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S8
13_1_40cm_3_scaffold_5_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


comp(6550..7083)
DNA (534bp) protein (178aa)
50S ribosomal protein L5 n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BMD2_HYPBU
rpl5p; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_13_Bathyarchaeota_38_9_curated
LSU ribosomal protein L5P
13_1_40cm_3_scaffold_5_13
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(7089..7835)
DNA (747bp) protein (249aa)
30S ribosomal protein S4e n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=RS4E_IGNH4
30S ribosomal protein S4
30S ribosomal protein S4e {ECO:0000255|HAMAP-Rule:MF_00485}; TaxID=453591 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.;" source="Ignicoccus hospita
13_1_40cm_3_scaffold_5_14

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comp(7838..8203)
DNA (366bp) protein (122aa)
50S ribosomal protein L24P n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=RL24_THEPD
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl24p; 50S ribosomal protein L24P
13_1_40cm_3_scaffold_5_15

Not on your lists


comp(8210..8488)
DNA (279bp) protein (93aa)
50S ribosomal protein L14 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJQ3_ACIS0
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14
13_1_40cm_3_scaffold_5_16
unknown

Not on your lists

8635..9111
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_3_scaffold_5_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8977..9270)
DNA (294bp) protein (98aa)
rpn; ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
ribonuclease P n=1 Tax=Methanobrevibacter smithii RepID=UPI000367F1B0
13_1_40cm_3_scaffold_5_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


comp(9267..9485)
DNA (219bp) protein (73aa)
50S ribosomal protein L29P n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TT83_9ARCH
50S ribosomal protein L29P; K02904 large subunit ribosomal protein L29 Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L29P
13_1_40cm_3_scaffold_5_19

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comp(9454..10179)
DNA (726bp) protein (242aa)
Ribosomal protein S3, eukaryotic/archaeal type (Fragment) n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TAB9_9ARCH
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
13_1_40cm_3_scaffold_5_20

Not on your lists


comp(10182..10649)
DNA (468bp) protein (156aa)
50S ribosomal protein L22P n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TAY8_9ARCH
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl22p; 50S ribosomal protein L22p
13_1_40cm_3_scaffold_5_21
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10797..11597
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6V2V8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAL80226.1}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain ATC
13_1_40cm_3_scaffold_5_22
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11764..12474
DNA (711bp) protein (237aa)
circadian clock protein KaiC (EC:2.7.11.1)
UPI0003D1C594 related cluster n=1 Tax=unknown RepID=UPI0003D1C594
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:ETA67929.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; M
13_1_40cm_3_scaffold_5_23
unknown

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12476..12925
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_3_scaffold_5_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

13431..14657
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000368C654
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 Tax=RBG_16_Archaea_50_20_curated
cdc6; cell division control protein 6
13_1_40cm_3_scaffold_5_25
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

15498..16628
DNA (1131bp) protein (377aa)
dys-1; deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase-like protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YJD3_9BACT
putative deoxyhypusine synthase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_3_scaffold_5_26
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16625..17695)
DNA (1071bp) protein (357aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_13_Bathyarchaeota_46_16b_curated
myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] id=5240582 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_3_scaffold_5_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17808..20060)
DNA (2253bp) protein (751aa)
ski2-like helicase; K03726 helicase [EC:3.6.4.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
helicase (EC:3.6.1.-)
Putative ski2-type helicase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TAX6_9EURY
13_1_40cm_3_scaffold_5_28
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(20083..24837)
DNA (4755bp) protein (1585aa)
Uncharacterized protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQ49_THELI
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_5_29
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(24834..25418)
DNA (585bp) protein (195aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_5_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

25551..26555
DNA (1005bp) protein (335aa)
Replication factor C small subunit n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P9H4_METFA
DNA replication factor C, small subunit; K04801 replication factor C small subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
rfc; replication factor C small subunit
Displaying items 1-30 of 58 in total

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