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13_1_40cm_3_scaffold_554

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_554_1
unknown

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comp(3..191)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_3_scaffold_554_2
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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470..823
DNA (354bp) protein (118aa)
Transcriptional regulator, HxlR family n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RGJ2_METP4
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADN35203.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="
13_1_40cm_3_scaffold_554_3
unknown

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comp(820..1227)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_3_scaffold_554_4

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comp(1478..3001)
DNA (1524bp) protein (508aa)
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHA9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EQB63668.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
13_1_40cm_3_scaffold_554_5
unknown

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comp(3131..3433)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_3_scaffold_554_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3626..3988)
DNA (363bp) protein (121aa)
Nascent polypeptide-associated complex protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDX7_METFS
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
nac; nascent polypeptide-associated complex protein
13_1_40cm_3_scaffold_554_7
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(4034..4513)
DNA (480bp) protein (160aa)
PUA domain containing protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGA6_ARCPA
PUA domain containing protein
PUA domain containing protein {ECO:0000313|EMBL:ADB57331.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profu
13_1_40cm_3_scaffold_554_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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4655..5164
DNA (510bp) protein (170aa)
XRE family transcriptional regulator n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RA04_METFO
transcriptional regulator, xre family; K03627 putative transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
XRE family transcriptional regulator
13_1_40cm_3_scaffold_554_9
unknown

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comp(5408..5731)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_3_scaffold_554_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(5750..6313)
DNA (564bp) protein (188aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] Tax=RBG_16_Archaea_50_20_curated
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX36_METFV
hypothetical protein
13_1_40cm_3_scaffold_554_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6388..6915
DNA (528bp) protein (176aa)
Transcription factor E n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9K2_9ARCH
transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription factor
13_1_40cm_3_scaffold_554_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6940..7761
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JDD6_THEKO
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_554_13
Pyrobaculum calidifontis, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(8114..9313)
DNA (1200bp) protein (400aa)
Formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:ABO07643.1}; EC=2.8.3.16 {ECO:0000313|EMBL:ABO07643.1};; TaxID=410359 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobac
Formyl-CoA transferase n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MSM6_PYRCJ
13_1_40cm_3_scaffold_554_14
unknown

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9376..9936
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_3_scaffold_554_15
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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9950..10282
DNA (333bp) protein (111aa)
hypothetical protein; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_13_Bathyarchaeota_52_12_curated
Bacterial lipoate protein ligase C-terminus n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BWS9_ANAMD
Bacterial lipoate protein ligase C-terminus
13_1_40cm_3_scaffold_554_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

10342..11058
DNA (717bp) protein (239aa)
Biotin/lipoate A/B protein ligase family protein; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_13_Bathyarchaeota_38_9_curated
Lipoate-protein ligase A n=1 Tax=uncultured Acidilobus sp. CIS RepID=V4JWC4_9CREN
Biotin/lipoate A/B protein ligase family protein
13_1_40cm_3_scaffold_554_17
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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11574..11909
DNA (336bp) protein (112aa)
Transcriptional regulator, AsnC family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAG3_ACIB4
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDY37045.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
13_1_40cm_3_scaffold_554_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

11911..12330
DNA (420bp) protein (140aa)
Transcriptional regulator, AsnC family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BF61_9EURY
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_13_Bathyarchaeota_46_16b_curated
transcriptional regulator, AsnC family
13_1_40cm_3_scaffold_554_19

Not on your lists

12420..12596
DNA (177bp) protein (59aa)
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:AIF05268.1}; TaxID=1456064 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_181_D10.;"
13_1_40cm_3_scaffold_554_20
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

12861..13829
DNA (969bp) protein (323aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus A
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthase A n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVP4_9BACT
13_1_40cm_3_scaffold_554_21
unknown

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comp(13879..14721)
DNA (843bp) protein (281aa)

This feature has no annotations

13_1_40cm_3_scaffold_554_22
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(14718..15722)
DNA (1005bp) protein (335aa)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250};; Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GL82_METTF
nadC; nicotinate-nucleotide pyrophosphorylase NadC
Displaying 22 items

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