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13_1_40cm_3_scaffold_599

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_599_1
unknown

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1..177
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_3_scaffold_599_2
unknown

Not on your lists

174..740
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_40cm_3_scaffold_599_3
unknown

Not on your lists

comp(826..1326)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_3_scaffold_599_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(1328..2044)
DNA (717bp) protein (239aa)
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK29_ACIS0
serine/threonine protein kinase involved in cell cycle control Tax=RBG_16_Archaea_50_20_curated
serine/threonine protein kinase involved in cell cycle control
13_1_40cm_3_scaffold_599_5
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

3072..4247
DNA (1176bp) protein (392aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00038245FD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACF13048.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (stra
13_1_40cm_3_scaffold_599_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

4278..5885
DNA (1608bp) protein (536aa)
ELP3; RNA polymerase II complex ELP3 subunit; K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ELP3 component of the RNA polymerase II complex, consists of an N-terminal BioB/LipA-like domain and a C-terminal histone acetylase domain n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TWI2_METKA
ELP3; RNA polymerase II complex ELP3 subunit
13_1_40cm_3_scaffold_599_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

5923..7257
DNA (1335bp) protein (445aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00037B0CDE
glutamyl-tRNA(Gln) amidotransferase subunit D
13_1_40cm_3_scaffold_599_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

7441..9162
DNA (1722bp) protein (574aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX39_THEPD
glutamyl-tRNA(Gln) amidotransferase Tax=RBG_13_Bathyarchaeota_38_9_curated
glutamyl-tRNA(Gln) amidotransferase subunit E
13_1_40cm_3_scaffold_599_9

Not on your lists

9207..9644
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Archaea RepID=UPI0003808D41
Marine sediment metagenome DNA, contig: S01H1_L05582 {ECO:0000313|EMBL:GAF82676.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative HTH-type transcriptional regulator
13_1_40cm_3_scaffold_599_10
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(10119..10958)
DNA (840bp) protein (280aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20) Tax=RBG_16_Thaumarchaeota_49_8_curated
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ2_NITGG
13_1_40cm_3_scaffold_599_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(10936..12054)
DNA (1119bp) protein (373aa)
trpB; tryptophan synthase subunit beta (EC:4.1.2.20) Tax=RBG_16_Archaea_50_20_curated
trpB; tryptophan synthase subunit beta (EC:4.1.2.20)
Tryptophan synthase beta chain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBB0_NITGG
13_1_40cm_3_scaffold_599_12
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(12138..12914)
DNA (777bp) protein (259aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol-phosphate synthase {ECO:0000313|EMBL:ABX12810.1}; EC=4.1.1.48 {ECO:0000313|EMBL:ABX12810.1};; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitr
Indole-3-glycerol-phosphate synthase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A299_NITMS
13_1_40cm_3_scaffold_599_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(12918..13943)
DNA (1026bp) protein (342aa)
trpGD; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase (EC:4.1.3.27); K13497 anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] Tax=RBG_16_Archaea_50
Anthranilate phosphoribosyltransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=TRPD_SYMTH
anthranilate phosphoribosyltransferase
13_1_40cm_3_scaffold_599_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(14330..15142)
DNA (813bp) protein (271aa)
fructose bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Archaea_50_20_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NHZ5_METST
13_1_40cm_3_scaffold_599_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

15590..17368
DNA (1779bp) protein (593aa)
GlmS; glucosamine 6-phosphate synthetase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RBG_16_Archaea_50_20_curated
glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00036C48FC
13_1_40cm_3_scaffold_599_16
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

17818..18762
DNA (945bp) protein (315aa)
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:ABQ89545.1}; EC=2.7.1.- {ECO:0000313|EMBL:ABQ89545.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexin
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USE2_ROSS1
LPPG:FO 2-phospho-L-lactate transferase
13_1_40cm_3_scaffold_599_17
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18759..19421
DNA (663bp) protein (221aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=112989
2-phospho-L-lactate guanylyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGC4_9CHLR
hypothetical protein
13_1_40cm_3_scaffold_599_18
unknown

Not on your lists

19497..20174
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-E16 RepID=UPI000381BC1C
13_1_40cm_3_scaffold_599_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(20160..21005)
DNA (846bp) protein (282aa)
purA; adenylosuccinate synthase (EC:6.3.4.4) Tax=RBG_13_Bathyarchaeota_38_9_curated
purA; Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUA8_9ARCH
13_1_40cm_3_scaffold_599_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(21469..22359)
DNA (891bp) protein (297aa)
Sec-independent protein translocase protein TatC n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D1_9ARCH
Sec-independent protein secretion pathway component TatC; K03118 sec-independent protein translocase protein TatC Tax=RBG_16_Archaea_50_20_curated
sec-independent protein translocase protein TatC
13_1_40cm_3_scaffold_599_21
unknown

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comp(22369..22638)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_3_scaffold_599_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(22653..22943)
DNA (291bp) protein (97aa)
Sec-independent protein translocase protein TatA n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D2_9ARCH
tatA; putative sec-independent protein translocase protein; K03116 sec-independent protein translocase protein TatA Tax=RBG_16_Archaea_50_20_curated
sec-independent protein translocase protein TatA
13_1_40cm_3_scaffold_599_23
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

23022..23825
DNA (804bp) protein (268aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XR44_9BACT
electron transfer flavoprotein subunit beta Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
electron transfer flavoprotein subunit beta
13_1_40cm_3_scaffold_599_24
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

23826..24806
DNA (981bp) protein (327aa)
electron transfer flavoprotein alpha-subunit; K03522 electron transfer flavoprotein alpha subunit Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
Electron transfer flavoprotein subunit alpha id=2225030 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
electron transfer flavoprotein subunit alpha/beta
13_1_40cm_3_scaffold_599_25
unknown

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comp(24816..25181)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_3_scaffold_599_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(25241..25534)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003722417
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K03855 ferredoxin like protein Tax=RBG_16_Euryarchaeota_68_12_curated
4Fe-4S ferredoxin
13_1_40cm_3_scaffold_599_27
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(25535..26725)
DNA (1191bp) protein (397aa)
FixC; dehydrogenases; K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI000317975F
FixC; dehydrogenases
13_1_40cm_3_scaffold_599_28
unknown

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comp(26859..27359)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_3_scaffold_599_29
unknown

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27582..27779
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 29 items

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