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13_1_40cm_3_scaffold_99

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_99_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

211..888
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000360E156
glycine cleavage H-protein; K02437 glycine cleavage system H protein Tax=RBG_16_Archaea_50_20_curated
gcsH2; glycine cleavage system protein H
13_1_40cm_3_scaffold_99_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(928..1359)
DNA (432bp) protein (144aa)
thiosulfate sulfurtransferase (EC:2.8.1.1) Tax=RBG_16_Archaea_50_20_curated
thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDZ6_NITGG
13_1_40cm_3_scaffold_99_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(1375..1809)
DNA (435bp) protein (145aa)
thiosulfate sulfurtransferase (EC:2.8.1.1) Tax=RBG_16_Archaea_50_20_curated
rhodanese-related sulfurtransferase (EC:2.8.1.2 2.8.1.1)
Rhodanese domain-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1D3X0_9ZZZZ
13_1_40cm_3_scaffold_99_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

2192..3136
DNA (945bp) protein (315aa)
Putative alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ85_NITGG
alcohol dehydrogenase zinc-binding domain-containing protein
alcohol dehydrogenase zinc-binding domain-containing protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_99_5
unknown

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3254..3565
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_3_scaffold_99_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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4035..5819
DNA (1785bp) protein (595aa)
UPF0273 protein Igag_1013 n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SNN1_IGNAA
hypothetical protein containing KaiC-domain Tax=RBG_13_Bathyarchaeota_38_9_curated
circadian clock protein KaiC
13_1_40cm_3_scaffold_99_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(5824..6594)
DNA (771bp) protein (257aa)
putative circadian clock protein KaiC (EC:2.7.11.1) Tax=RBG_13_Bathyarchaeota_38_9_curated
putative circadian clock protein KaiC (EC:2.7.11.1)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
13_1_40cm_3_scaffold_99_8
unknown

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comp(7241..7570)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_3_scaffold_99_9
RBG_16_Archaea_50_20_curated, Archaea

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7664..8449
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI0003704F28
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_99_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(8712..10382)
DNA (1671bp) protein (557aa)
Thermosome n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGB1_ARCPA rbh
thsA-2; Thermosome alpha subunit (Thermosome subunit 1) (Chaperonin alpha subunit) (thsA) Tax=RBG_16_Archaea_50_20_curated
thermosome
13_1_40cm_3_scaffold_99_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10521..11714
DNA (1194bp) protein (398aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_3_scaffold_99_12
unknown

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11848..12258
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_3_scaffold_99_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12255..12893)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYP5_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_99_14
RBG_16_Archaea_50_20_curated, Archaea

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12910..14214
DNA (1305bp) protein (435aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=RBG_16_Archaea_50_20_curated
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparaginyl-tRNA synthetase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8T9_9ARCH
13_1_40cm_3_scaffold_99_15
Desulfurococcus fermentans, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(14690..15409)
DNA (720bp) protein (240aa)
Phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AFL66831.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AFL66831.1};; TaxID=768672 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcac
Phosphoglycerate dehydrogenase n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XSA7_9CREN
13_1_40cm_3_scaffold_99_16
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15636..16937)
DNA (1302bp) protein (434aa)
NAD(P)H-nitrite reductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QD74_9FIRM
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:EKP94581.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Th
NADH oxidase (noxA-2)
13_1_40cm_3_scaffold_99_17
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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17197..17940
DNA (744bp) protein (248aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Thaumarchaeota_49_8_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QTX7_VULDI
13_1_40cm_3_scaffold_99_18
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

17955..18878
DNA (924bp) protein (308aa)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZD3_HALTV
inositol phosphatase/fructose-16-bisphosphatase
13_1_40cm_3_scaffold_99_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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18903..19598
DNA (696bp) protein (232aa)
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_13_Bathyarchaeota_46_16b_curated
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=3 Tax=Pyrococcus RepID=TPIS_PYRFU
13_1_40cm_3_scaffold_99_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

19667..20116
DNA (450bp) protein (150aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=24447693 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
Heme O oxygenase-like protein
13_1_40cm_3_scaffold_99_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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20225..20923
DNA (699bp) protein (233aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000363D412
cytochrome C oxidase subunit II
13_1_40cm_3_scaffold_99_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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21287..23335
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003758259
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:EJN58781.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sa
heme/copper-type cytochrome/quinol oxidase subunit 1
13_1_40cm_3_scaffold_99_23
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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23348..23620
DNA (273bp) protein (91aa)
Caa(3)-type oxidase, subunit IV {ECO:0000313|EMBL:ABS27063.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobac
13_1_40cm_3_scaffold_99_24
RBG_16_Archaea_50_20_curated, Archaea

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24426..25241
DNA (816bp) protein (272aa)
geranylgeranylglyceryl diphosphate synthase (EC:2.5.1.10 2.5.1.1 2.5.1.29); K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00036244E1
polyprenyl synthetase
13_1_40cm_3_scaffold_99_25
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(25355..26188)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97A29_THEVO
transposase, IS605 OrfB family Tax=RBG_16_Thaumarchaeota_49_8_curated
transposase
13_1_40cm_3_scaffold_99_26
RBG_16_Archaea_50_20_curated, Archaea

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26629..27000
DNA (372bp) protein (124aa)
nuoA; NADH-quinone oxidoreductase subunit A (EC:1.6.99.5)
NADH-ubiquinone oxidoreductase, subunit A n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU02_9ARCH
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_99_27
RBG_16_Archaea_50_20_curated, Archaea

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27011..27499
DNA (489bp) protein (163aa)
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
NADH dehydrogenase I subunit H (EC:1.6.5.3)
NADH dehydrogenase I subunit H n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8K4_9ARCH
13_1_40cm_3_scaffold_99_28

Not on your lists

27520..27978
DNA (459bp) protein (153aa)
NADH dehydrogenase (Quinone) (NuoH) {ECO:0000313|EMBL:AIF12408.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF12408.1};; TaxID=1456198 species="Archaea; Thaumarchaeota; environmental samples.;" source="unculture
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5) id=24483599 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
nuoH; NADH dehydrogenase I subunit H
13_1_40cm_3_scaffold_99_29
RBG_16_Archaea_50_20_curated, Archaea

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27986..28480
DNA (495bp) protein (165aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
13_1_40cm_3_scaffold_99_30
RBG_16_Archaea_50_20_curated, Archaea

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28483..28791
DNA (309bp) protein (103aa)
ndhE; NAD(P)H-quinone oxidoreductase subunit 4L (EC:1.6.5.-)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=14427491 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NADH-ubiquinone oxidoreductase subunit 4L Tax=RBG_16_Archaea_50_20_curated
Displaying items 1-30 of 51 in total

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