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13_1_40cm_3_scaffold_2391

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2391_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2..238
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003720D25
Putative transcription antitermination protein NusG Tax=RBG_16_Euryarchaeota_67_27_curated
Putative transcription antitermination protein NusG
13_1_40cm_3_scaffold_2391_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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455..934
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C8BAF
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_Euryarchaeota_68_13_curated
50S ribosomal protein L11
13_1_40cm_3_scaffold_2391_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(937..1740)
DNA (804bp) protein (268aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB21_9ARCH
transcriptional regulator TrmB Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator TrmB
13_1_40cm_3_scaffold_2391_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2010..2648
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003677105
LSU ribosomal protein L10Ae (L1p) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
50S ribosomal protein L1
13_1_40cm_3_scaffold_2391_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2658..3539
DNA (882bp) protein (294aa)
50S ribosomal protein L10 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7V4_9EURY
ribosomal protein L10 Tax=RBG_16_Euryarchaeota_68_13_curated
rplP0; acidic ribosomal protein P0
13_1_40cm_3_scaffold_2391_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3565..4287
DNA (723bp) protein (241aa)
50S ribosomal protein L12 n=2 Tax=unclassified Thermoplasmatales RepID=M7T3Z7_9EURY
rpl12p; 50S ribosomal protein L12 Tax=RBG_16_Euryarchaeota_67_27_curated
rpl12p; 50S ribosomal protein L12P
13_1_40cm_3_scaffold_2391_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(4244..5260)
DNA (1017bp) protein (339aa)
Radical SAM domain protein n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3T952_ACIB4
TIGR01210 family protein Tax=RBG_16_Euryarchaeota_68_13_curated
Radical SAM domain protein
13_1_40cm_3_scaffold_2391_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5304..6785)
DNA (1482bp) protein (494aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3W6_9ARCH
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_2391_trna_1
unknown

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6908..6980
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_2391_9
Thermoproteus sp. AZ2, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(6962..7393)
DNA (432bp) protein (144aa)
Ribonuclease HI n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1M4_9CREN
Uncharacterized protein {ECO:0000313|EMBL:KJR74200.1}; TaxID=1609232 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus sp. AZ2.;"
ribonuclease H
13_1_40cm_3_scaffold_2391_10
unknown

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7584..7826
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_3_scaffold_2391_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8018..8746)
DNA (729bp) protein (243aa)
methyltransferase type 11 Tax=RBG_16_Euryarchaeota_68_12_curated
Methyltransferase type 11 id=4765382 bin=GWA2_Elusimicrobia_69_24 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
methyltransferase type 11
13_1_40cm_3_scaffold_2391_12
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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8808..9593
DNA (786bp) protein (262aa)
Transcriptional regulator, TrmB n=1 Tax=Ferroplasma sp. Type II RepID=T0MA55_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EQB74074.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" s
putative transcriptional regulator
13_1_40cm_3_scaffold_2391_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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9744..10130
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037B18B2
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_3_scaffold_2391_14
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10135..11115)
DNA (981bp) protein (327aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=867904 species="Archae
GDP-mannose 4,6-dehydratase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZN4_METHD
GDP-mannose 4,6-dehydratase
13_1_40cm_3_scaffold_2391_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(11298..12368)
DNA (1071bp) protein (357aa)
Glycosyl transferase, group 1 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B824_METTP
putative glycosyltransferase Tax=RBG_16_Euryarchaeota_68_13_curated
glycosyl transferase, group 1
13_1_40cm_3_scaffold_2391_16
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

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comp(12372..12851)
DNA (480bp) protein (160aa)
Methyltransferase type 11 n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZLZ2_ANACC
Methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:AFZ60253.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).
Displaying 17 items

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