ggKbase home page

13_1_40cm_3_scaffold_4180

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4180_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..525)
DNA (525bp) protein (175aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QI03_METMZ
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
13_1_40cm_3_scaffold_4180_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(580..1113)
DNA (534bp) protein (178aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RYL6_THEPD
hexapaptide repeat-containing transferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hexapaptide repeat-containing transferase
13_1_40cm_3_scaffold_4180_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1210..2340
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] Tax=RBG_19FT_C
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC:2.7.8.15)
glycosyl transferase family protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] id=5241043 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_3_scaffold_4180_4
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

2341..3237
DNA (897bp) protein (299aa)
Polysaccharide deacetylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLU3_9CHLR
group 1 glycosyl transferase Tax=RBG_16_Chloroflexi_50_9_curated
polysaccharide deacetylase
13_1_40cm_3_scaffold_4180_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3228..4370
DNA (1143bp) protein (381aa)
Exopolysaccharide biosynthesis protein, glycosyltransferase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAR3_9SPHN
glycosyl transferase family protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
glycosyl transferase family protein
13_1_40cm_3_scaffold_4180_6
RHI_OP11_Curtissbacteria_38_9b, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

4373..5080
DNA (708bp) protein (236aa)
methyltransferase type 11 Tax=RIFCSPHIGHO2_12_FULL_OP11_Curtissbacteria_38_9b_curated
methyltransferase type 11 id=15187837 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
13_1_40cm_3_scaffold_4180_7
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5044..6225)
DNA (1182bp) protein (394aa)
Glycogen synthase n=1 Tax=Frankia sp. QA3 RepID=I8QFF2_9ACTO
Glycogen synthase {ECO:0000313|EMBL:EIV90942.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
glycogen synthase
13_1_40cm_3_scaffold_4180_8
unknown

Not on your lists

comp(6529..6825)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_3_scaffold_4180_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6864..8435
DNA (1572bp) protein (524aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XY8_METBU
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_4180_10
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(8461..9600)
DNA (1140bp) protein (380aa)
Glycosyltransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QCE6_9FIRM
RfaG4; glycosyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
glycosyltransferase
13_1_40cm_3_scaffold_4180_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9682..10914)
DNA (1233bp) protein (411aa)
Marine sediment metagenome DNA, contig: S03H2_L03946 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_4180_12
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11004..12515)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=candidate division WS3 bacterium JGI 0000059-A10 RepID=UPI000365CF20
Uncharacterized protein {ECO:0000313|EMBL:AKB62432.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina m
hypothetical protein
13_1_40cm_3_scaffold_4180_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12687..13295
DNA (609bp) protein (203aa)
Phosphoribosyl pyrophosphokinase n=1 Tax=mine drainage metagenome RepID=T1A0S3_9ZZZZ
ribose-phosphate pyrophosphokinase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribose-phosphate pyrophosphokinase
Displaying 13 items

View Taxonomy