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13_1_40cm_4_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_104_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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1..1617
DNA (1617bp) protein (539aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RBG_16_Actinobacteria_67_10_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=uncultured bacterium W5-102b RepID=H9BWL6_9BACT
13_1_40cm_4_scaffold_104_2
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

1657..2721
DNA (1065bp) protein (355aa)
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14425027 bin=bin1_lowGC species=Methylomonas sp. MK1 genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
vitamin-B12 independent methionine synthase
13_1_40cm_4_scaffold_104_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

2777..3325
DNA (549bp) protein (183aa)
msrA; peptide methionine sulfoxide reductase MsrA; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RBG_16_Armatimonadetes_67_12_curated
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=14630607 bin=bin9_gal15 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
methionine-S-sulfoxide reductase
13_1_40cm_4_scaffold_104_4
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

3322..3819
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q310G8_DESDG
hypothetical protein Tax=RBG_16_Chloroflexi_60_22_curated
hypothetical protein
13_1_40cm_4_scaffold_104_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3830..4267
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I408_CALAS
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_104_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4242..8114)
DNA (3873bp) protein (1291aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
DEAD/H box helicase domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVL6_PSEUL
DEAD/DEAH box helicase
13_1_40cm_4_scaffold_104_7
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8111..8569)
DNA (459bp) protein (153aa)
DEAD/H box helicase domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVL6_PSEUL
DEAD/DEAH box helicase
DEAD/H box helicase domain protein {ECO:0000313|EMBL:BAK77559.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Ps
13_1_40cm_4_scaffold_104_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8589..9785)
DNA (1197bp) protein (399aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR7_9BACT
hydroxymethylbutenyl pyrophosphate reductase
13_1_40cm_4_scaffold_104_9
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9790..10851)
DNA (1062bp) protein (354aa)
Oxidoreductase, Gfo/Idh/MocA family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WZ1_STIAD
Gfo/Idh/MocA family oxidoreductase
Oxidoreductase, Gfo/Idh/MocA family {ECO:0000313|EMBL:ADO75007.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;"
13_1_40cm_4_scaffold_104_10
unknown

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comp(10848..11363)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_4_scaffold_104_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11360..11842)
DNA (483bp) protein (161aa)
hypothetical protein; K12073 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative Pol-Pal system-associated acyl-CoA thioesterase n=1 Tax=mine drainage metagenome RepID=E6PEA1_9ZZZZ
thioesterase superfamily protein
13_1_40cm_4_scaffold_104_12

Not on your lists

comp(11914..12318)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHN97945.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
hoxA; two component sigma-54-dependent hydrogenase transcriptional regulator, Fis family
13_1_40cm_4_scaffold_104_13

Not on your lists

comp(12487..15042)
DNA (2556bp) protein (852aa)
Putative helicase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR3_9BACT
Putative helicase {ECO:0000313|EMBL:AAY89249.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
helicase, DEAD/DEAH family
13_1_40cm_4_scaffold_104_14
unknown

Not on your lists

comp(15173..15445)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_4_scaffold_104_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15915..18041
DNA (2127bp) protein (709aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003688C31
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis sensory transducer
13_1_40cm_4_scaffold_104_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18136..19578
DNA (1443bp) protein (481aa)
OmpA domain protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JEY0_9BACT id=5225687 bin=16ft_combo_ws3_JS1 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ompA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ompA family protein
13_1_40cm_4_scaffold_104_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19602..21194
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003610E85
OmpA/MotB domain-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
OmpA family protein
13_1_40cm_4_scaffold_104_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21233..23560
DNA (2328bp) protein (776aa)
Peptidase M14, carboxypeptidase A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028C7_SOLUE
peptidase M14, carboxypeptidase A Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M14 carboxypeptidase A
13_1_40cm_4_scaffold_104_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23615..24832
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EIN0_THECK
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_104_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24845..26872)
DNA (2028bp) protein (676aa)
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YC07_SORCE
hypothetical protein
13_1_40cm_4_scaffold_104_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26919..27794
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJ46_SORCE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_104_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

27801..29444
DNA (1644bp) protein (548aa)
Peptidase M28 n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QCN4_9CYAN
Predicted aminopeptidase {ECO:0000313|EMBL:CDM65305.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M28
13_1_40cm_4_scaffold_104_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

29644..30741
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_104_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

30796..31464
DNA (669bp) protein (223aa)
Putative transcriptional regulator n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AAZ9_CARHZ
transcriptional regulator TrmB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcriptional regulator
13_1_40cm_4_scaffold_104_25
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

31461..32399
DNA (939bp) protein (313aa)
hypothetical protein n=2 Tax=candidate division YNPFFA RepID=UPI0003604D5F
alpha/beta hydrolase fold protein Tax=RBG_16_Chloroflexi_68_14_curated
alpha/beta hydrolase fold protein
13_1_40cm_4_scaffold_104_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

32437..33030
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003121337
h16_A1149; TetR/AcrR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
TetR family transcriptional regulator
13_1_40cm_4_scaffold_104_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(33035..34591)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_104_28
unknown

Not on your lists

34708..34923
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_4_scaffold_104_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(35666..38053)
DNA (2388bp) protein (796aa)
lon; ATP-dependent Lon protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Lon protease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKJ4_SINAD
ATP-dependent protease La
13_1_40cm_4_scaffold_104_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

39264..40073
DNA (810bp) protein (270aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL9_GEMAT
protein kinase
Displaying items 1-30 of 63 in total

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