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13_1_40cm_4_scaffold_106

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_106_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..858)
DNA (858bp) protein (286aa)
magnesium transporter; K06213 magnesium transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
magnesium transporter; K06213 magnesium transporter id=14626380 bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
magnesium transporter
13_1_40cm_4_scaffold_106_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

930..3614
DNA (2685bp) protein (895aa)
kdpD; sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation (EC:2.7.1.-) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
kdpD; sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation (EC:2.7.1.-)
Sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR3_9BACT
13_1_40cm_4_scaffold_106_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3607..4299
DNA (693bp) protein (231aa)
kdpE; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) id=3779763 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
kdpE; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family)
13_1_40cm_4_scaffold_106_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4336..6873)
DNA (2538bp) protein (846aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14626716 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_106_5
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6924..7769)
DNA (846bp) protein (282aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PHD3_MARAH
Phosphonate ABC transporter phosphate-binding periplasmic component {ECO:0000313|EMBL:EXJ13789.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Th
phosphonate ABC transporter periplasmic phosphonate-binding protein
13_1_40cm_4_scaffold_106_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7840..8298)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IA75_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44139.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_1_40cm_4_scaffold_106_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8794..9678
DNA (885bp) protein (295aa)
N-carbamoyl-D-amino acid hydrolase (EC:3.5.1.77)
N-carbamyl-D-amino acid amidohydrolase id=4793593 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
N-carbamyl-D-amino acid amidohydrolase Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_4_scaffold_106_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9675..11093
DNA (1419bp) protein (473aa)
h16_A3075; dihydropyrimidinase (EC:3.5.2.2); K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=GWC2_Rokubacteria_70_16_curated
hyuA2; D-hydantoinase HyuA (EC:3.5.2.-)
D-Hydantoinase id=4793592 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_106_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11634..12455
DNA (822bp) protein (274aa)
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MmgE/PrpD family protein id=3138537 bin=GWC2_Methylomirabilis_70_24 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
MmgE/PrpD family protein
13_1_40cm_4_scaffold_106_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12684..13034)
DNA (351bp) protein (117aa)
Dehydrogenase (Modular protein) id=3428787 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_106_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13613..14356)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030BA820
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:ETW98374.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
ABC transporter-like protein
13_1_40cm_4_scaffold_106_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14310..15065)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00037118FC
livG; branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hemolysin III
13_1_40cm_4_scaffold_106_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15098..16141)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030E5490
livM; branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ABC transporter permease
13_1_40cm_4_scaffold_106_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16138..17013)
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SGA3_9BURK
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
High-affinity branched-chain amino acid transport system permease protein LivH
13_1_40cm_4_scaffold_106_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17105..18307)
DNA (1203bp) protein (401aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VMX2_RHOPX
Uncharacterized protein {ECO:0000313|EMBL:ETW98378.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
extracellular ligand-binding receptor
13_1_40cm_4_scaffold_106_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18559..19605
DNA (1047bp) protein (349aa)
hypothetical protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Blr7063 protein id=4911277 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-ketogluconate reductase
13_1_40cm_4_scaffold_106_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

19620..20405
DNA (786bp) protein (262aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_40cm_4_scaffold_106_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20606..22546
DNA (1941bp) protein (647aa)
multi-sensor hybrid histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Multi-sensor hybrid histidine kinase id=4327907 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_106_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(22808..24235)
DNA (1428bp) protein (476aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=GWA2_Rokubacteria_70_23_curated
dihydropyrimidinase (EC:3.5.2.2)
Dihydropyrimidinase id=3971522 bin=GWC2_Methylomirabilis_70_24 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_106_20
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

24474..25268
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4C800
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV84204.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanens
13_1_40cm_4_scaffold_106_21
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(25287..26336)
DNA (1050bp) protein (350aa)
mreB; Rod shape-determining protein mreB Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
mreB; Rod shape-determining protein mreB id=14626892 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
mreB; Rod shape-determining protein mreB
13_1_40cm_4_scaffold_106_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(26515..26832)
DNA (318bp) protein (106aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Antibiotic biosynthesis monooxygenase domain-containing protein id=3139743 bin=GWF2_Methylomirabilis_70_14 species=Gordonia polyisoprenivorans genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_106_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27006..28319
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B75854
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_1_40cm_4_scaffold_106_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

28334..29044
DNA (711bp) protein (237aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14431475 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_106_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29086..29628
DNA (543bp) protein (181aa)
Glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase n=2 Tax=Cupriavidus RepID=L2EJ51_9BURK
oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase
13_1_40cm_4_scaffold_106_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

29926..30570
DNA (645bp) protein (215aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2K7N5_9BURK
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
high-affinity branched-chain amino acid ABC transporter permease protein
13_1_40cm_4_scaffold_106_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

30567..32315
DNA (1749bp) protein (583aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CQK7_9BURK
branched-chain amino acid ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_R
high-affinity branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_106_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

32308..33018
DNA (711bp) protein (237aa)
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type branched-chain amino acid transport system, ATPase component id=3434010 bin=GWF2_Methylomirabilis_70_14 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_106_29
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33176..34123
DNA (948bp) protein (316aa)
Catechol 2,3-dioxygenase-like protein n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AF42_BURM1
Catechol 2,3 dioxygenase {ECO:0000313|EMBL:ETX05942.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
catechol 2,3-dioxygenase-like protein
13_1_40cm_4_scaffold_106_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

34134..35339
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030E032F
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate-binding protein
Displaying items 1-30 of 34 in total

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