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13_1_40cm_4_scaffold_10797

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_10797_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..413)
DNA (411bp) protein (137aa)
Saccharopine dehydrogenase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N3_GEMAT
Saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHG89937.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_10797_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

515..1090
DNA (576bp) protein (192aa)
TetR family transcriptional regulator n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00037AED96
TetR/AcrR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bacterial regulatory s, tetR family protein
13_1_40cm_4_scaffold_10797_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1171..2013)
DNA (843bp) protein (281aa)
Serine/threonine protein phosphatase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWS7_CORCM
membrane protein Tax=RBG_16_Nitrospirae_64_22_curated
yaeI2; serine/threonine protein phosphatase
13_1_40cm_4_scaffold_10797_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2404..3714
DNA (1311bp) protein (437aa)
Peptidase S41 {ECO:0000313|EMBL:CCH51894.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CCH51894.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source=
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00037EF4AC
peptidase S41
13_1_40cm_4_scaffold_10797_5
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3779..4600)
DNA (822bp) protein (274aa)
Carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_16_Spirochaete_67_19_curated
Dienelactone hydrolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9Q3_9BACT
Dienelactone hydrolase-related enzyme
13_1_40cm_4_scaffold_10797_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4597..5637)
DNA (1041bp) protein (347aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
13_1_40cm_4_scaffold_10797_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5697..8165)
DNA (2469bp) protein (823aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative two-component response regulator
13_1_40cm_4_scaffold_10797_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8172..9101)
DNA (930bp) protein (310aa)
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Threonine dehydratase n=3 Tax=Amycolatopsis mediterranei RepID=D8HJJ9_AMYMU
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_4_scaffold_10797_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(9103..11598)
DNA (2496bp) protein (832aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA gyrase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L6_GEMAT
DNA gyrase subunit A
13_1_40cm_4_scaffold_10797_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11859..12911)
DNA (1053bp) protein (351aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L3_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alcohol dehydrogenase zinc-binding domain protein
13_1_40cm_4_scaffold_10797_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12940..14610)
DNA (1671bp) protein (557aa)
translocation protein TolB n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
WD40 domain-containing protein; K03641 TolB protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
WD40 domain-containing protein
13_1_40cm_4_scaffold_10797_12
Shewanella sp. YQH10, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15703..16140
DNA (438bp) protein (146aa)
L-asparaginase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F64
Uncharacterized protein {ECO:0000313|EMBL:KFZ35960.1}; TaxID=1515746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. YQH10
hypothetical protein
13_1_40cm_4_scaffold_10797_13
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16241..17476
DNA (1236bp) protein (412aa)
Amidohydrolase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PZD5_KRIFD
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ADB33744.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DS
13_1_40cm_4_scaffold_10797_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17464..19176
DNA (1713bp) protein (571aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW4_KORVE
N-acyl-D-aspartate/D-glutamate deacylase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
13_1_40cm_4_scaffold_10797_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19173..19526
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_10797_16
unknown

Not on your lists

comp(20057..20671)
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_40cm_4_scaffold_10797_17
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21033..21794)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) RepID=A5DD47_PICGU
baaA1; trimeric autotransporter adhesin
Tax=RBG_16_RIF_CHLX_69_14_curated
13_1_40cm_4_scaffold_10797_18
Pseudomonas sp. 313, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22040..22789
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002DABDD0
13_1_40cm_4_scaffold_10797_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22791..23378
DNA (588bp) protein (196aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
rnhA; ribonuclease HI (EC:3.1.26.4)
Ribonuclease HI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K0_GEMAT
13_1_40cm_4_scaffold_10797_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23365..23868
DNA (504bp) protein (168aa)
CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cd allosteric enzyme id=3383322 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
CMP/dCMP deaminase
13_1_40cm_4_scaffold_10797_21
unknown

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23915..24076
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 21 items

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