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13_1_40cm_4_scaffold_1214

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1214_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1..468
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TU68_MARTH
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_1214_2

Not on your lists

comp(462..1556)
DNA (1095bp) protein (365aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA10983.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_1214_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1585..2646)
DNA (1062bp) protein (354aa)
Putative asparaginase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P9_GEMAT
putative asparaginase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative asparaginase
13_1_40cm_4_scaffold_1214_4
unknown

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2738..3178
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_4_scaffold_1214_5
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3162..3896
DNA (735bp) protein (245aa)
Glycosyl transferase family 2 n=2 Tax=Desulfovibrio vulgaris RepID=E3ISE2_DESVR
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADP87056.1}; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desu
13_1_40cm_4_scaffold_1214_6
unknown

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3893..4231
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_1214_7
unknown

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4260..5084
DNA (825bp) protein (275aa)

This feature has no annotations

13_1_40cm_4_scaffold_1214_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5103..6161
DNA (1059bp) protein (353aa)
quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Quinolinate phosphoribosyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
13_1_40cm_4_scaffold_1214_9
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(6187..8199)
DNA (2013bp) protein (671aa)
tolB; peptidase S9 prolyl oligopeptidase active site domain protein (EC:3.4.19.1)
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AGY58328.1}; EC=3.4.19.1 {ECO:0000313|EMBL:AGY58328.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria;
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QHI7_9CYAN
13_1_40cm_4_scaffold_1214_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8287..9216
DNA (930bp) protein (310aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N9_GEMAT
13_1_40cm_4_scaffold_1214_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9210..9977
DNA (768bp) protein (256aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Acetylglutamate kinase n=2 Tax=Chloroflexus RepID=ARGB_CHLAA
acetylglutamate kinase
13_1_40cm_4_scaffold_1214_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9974..11155
DNA (1182bp) protein (394aa)
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_Gemmatimonade
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P1_GEMAT
13_1_40cm_4_scaffold_1214_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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11878..12375
DNA (498bp) protein (166aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Isochorismatase hydrolase id=4242249 bin=GWF2_Planctomycete_41_51 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
13_1_40cm_4_scaffold_1214_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12372..13472
DNA (1101bp) protein (367aa)
Transaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S4_GEMAT
transaminase Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase class V
13_1_40cm_4_scaffold_1214_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13469..15064
DNA (1596bp) protein (532aa)
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=uncultured prokaryote RepID=H5SIQ4_9ZZZZ
D-3-phosphoglycerate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1214_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(15061..16092)
DNA (1032bp) protein (344aa)
id=12554872 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_4_scaffold_1214_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16092..18176)
DNA (2085bp) protein (695aa)
Chemotaxis sensory transducer n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TQS1_9FIRM
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methyl-accepting chemotaxis sensory transducer with Cache sensor
13_1_40cm_4_scaffold_1214_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


18245..20659
DNA (2415bp) protein (805aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Leucine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q0_GEMAT
leucyl-tRNA synthetase class Ia
13_1_40cm_4_scaffold_1214_19
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(20656..21735)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B701B3
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1214_20
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

21851..22432
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D14F6
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Acidobacteria_68_9_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_1214_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22429..23013
DNA (585bp) protein (195aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1214_22
unknown

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23032..23241
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 22 items

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