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13_1_40cm_4_scaffold_1252

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1252_1
unknown

Not on your lists

3..92
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_4_scaffold_1252_2
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99..434
DNA (336bp) protein (112aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1262685 species="Ba
Inorganic pyrophosphatase n=1 Tax=Acetobacter sp. CAG:977 RepID=R5Q3B0_9PROT
hypothetical protein
13_1_40cm_4_scaffold_1252_3
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(603..2072)
DNA (1470bp) protein (490aa)
Family 3 adenylate cyclase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CBM0_DESTA
Sensor histidine kinase {ECO:0000313|EMBL:EKE99434.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
family 3 adenylate cyclase
13_1_40cm_4_scaffold_1252_4
unknown

Not on your lists

comp(2086..2271)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_4_scaffold_1252_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2421..3698)
DNA (1278bp) protein (426aa)
peptidase M48 Ste24p Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M48, Ste24p id=2413284 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative Zn-dependent protease
13_1_40cm_4_scaffold_1252_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3700..4530)
DNA (831bp) protein (277aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2413285 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1252_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4524..5186)
DNA (663bp) protein (221aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627119 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1252_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5183..5572)
DNA (390bp) protein (130aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=2413287 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1252_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5592..6140)
DNA (549bp) protein (183aa)
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88)
Peptide deformylase id=2413338 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1252_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6185..7132)
DNA (948bp) protein (316aa)
Protein bugT-like protein id=2413339 bin=GWA2_Methylomirabilis_73_35 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein bugT Tax=GWA2_Rokubacteria_73_35_curated
protein bugT
13_1_40cm_4_scaffold_1252_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7129..8658)
DNA (1530bp) protein (510aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627123 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1252_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8669..9112)
DNA (444bp) protein (148aa)
Tripartite tricarboxylate transporter TctB family id=2413341 bin=GWA2_Methylomirabilis_73_35 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tripartite tricarboxylate transporter TctB family Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_1252_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(9294..9668)
DNA (375bp) protein (125aa)
putative ring-cleavage extradiol dioxygenase id=14627127 bin=bin7_NC10_sister species=Haloterrigena thermotolerans genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
putative ring-cleavage extradiol dioxygenase Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_1252_14
unknown

Not on your lists

comp(9665..10273)
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_40cm_4_scaffold_1252_15
unknown

Not on your lists

comp(10382..10564)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_4_scaffold_1252_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10634..11590)
DNA (957bp) protein (319aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=14627129 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1252_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11587..12267)
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627130 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1252_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12275..13120
DNA (846bp) protein (282aa)
Putative beta-lactamase id=4412858 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. S23321 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative beta-lactamase Tax=GWC2_Rokubacteria_70_16_curated
Beta-lactamase-like protein
13_1_40cm_4_scaffold_1252_19
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13117..14028
DNA (912bp) protein (304aa)
Putative oxidoreductase n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0QYT8_9ACTO
Putative oxidoreductase {ECO:0000313|EMBL:GAB17989.1}; TaxID=1077974 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
luciferase-like protein
13_1_40cm_4_scaffold_1252_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14037..15161)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00036BF7B6
sodium/hydrogen exchanger Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
sodium/hydrogen exchanger
13_1_40cm_4_scaffold_1252_21
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

16577..16903
DNA (327bp) protein (109aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=24647900 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=uncultivated_archaeon_J07ABHX6
hypothetical protein
13_1_40cm_4_scaffold_1252_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16968..17381)
DNA (414bp) protein (138aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2413347 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1252_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17378..17830)
DNA (453bp) protein (151aa)
Uncharacterized protein id=2413348 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MaoC-related acyl dehydratase
13_1_40cm_4_scaffold_1252_24
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(18029..18889)
DNA (861bp) protein (287aa)
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein Tax=RBG_16_Armatimonadetes_67_12_curated
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein id=24429354 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_1252_25
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(18890..19738)
DNA (849bp) protein (283aa)
ABC transporter permease; K02025 multiple sugar transport system permease protein id=14631355 bin=bin9_gal15 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=CSP1_3_Armatimonadetes
ABC transporter permease
13_1_40cm_4_scaffold_1252_26
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(19785..21188)
DNA (1404bp) protein (468aa)
sugar ABC transporter periplasmic ligand binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RBG_16_Armatimonadetes_67_12_curated
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein id=24429358 bin=RBG_19FT_COMBO_GAL15_69_19 species=Amycolatopsis sp. ATCC 39116 genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
sugar ABC transporter periplasmic ligand binding protein
13_1_40cm_4_scaffold_1252_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21333..22421
DNA (1089bp) protein (363aa)
menaquinone biosynthesis protein, family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative menaquinone biosynthesis protein, family id=2837809 bin=GWC2_Methylomirabilis_70_24 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
menaquinone biosynthesis protein, family
13_1_40cm_4_scaffold_1252_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22423..23505
DNA (1083bp) protein (361aa)
cofH1; FO synthase subunit 2 1 (EC:2.5.1.77)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2837977 bin=GWC2_Methylomirabilis_70_24 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_1252_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(23516..24346)
DNA (831bp) protein (277aa)
hypothetical protein; K07083 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hypothetical conserved protein id=4537022 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1252_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24394..24963)
DNA (570bp) protein (190aa)
metal-dependent phosphoesterase; K07053 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627812 bin=bin7_NC10_sister species=Kaistia granuli genus=Kaistia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
trpH; Protein trpH
Displaying items 1-30 of 43 in total

View Taxonomy