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13_1_40cm_4_scaffold_12549

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_12549_1
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117..869
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036E8D52
Choline binding protein D {ECO:0000313|EMBL:CEL14414.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126
hypothetical protein
13_1_40cm_4_scaffold_12549_2
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(910..1437)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LRF4_TEPAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCP27168.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaer
13_1_40cm_4_scaffold_12549_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1461..2096)
DNA (636bp) protein (212aa)
LuxR family transcriptional regulator n=1 Tax=Paenibacillus daejeonensis RepID=UPI000370B6A6
LuxR family DNA-binding response regulator Tax=GWC2_RIF_CHLX_73_18_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_4_scaffold_12549_4
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2224..3846
DNA (1623bp) protein (541aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIT1_MOOTA
amino acid permease
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABC19658.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; M
13_1_40cm_4_scaffold_12549_5
unknown

Not on your lists

3843..4046
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_12549_6
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(3981..4727)
DNA (747bp) protein (249aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermincola potens (strain JR) RepID=D5X9T9_THEPJ
TrmH family RNA methyltransferase
13_1_40cm_4_scaffold_12549_7
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(4740..6224)
DNA (1485bp) protein (495aa)
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=CG_Woesearch_03
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase id=4197346 bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
13_1_40cm_4_scaffold_12549_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6248..6724)
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Oscillibacter RepID=U2Q321_9FIRM
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
13_1_40cm_4_scaffold_12549_9
unknown

Not on your lists

comp(6785..6952)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_12549_10
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7029..7253)
DNA (225bp) protein (75aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000255|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=ISPD_PELTS
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_1_40cm_4_scaffold_12549_11

Not on your lists

comp(7253..7699)
DNA (447bp) protein (149aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AMX5_9FIRM
Marine sediment metagenome DNA, contig: S06H3_C00372 {ECO:0000313|EMBL:GAH97501.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_1_40cm_4_scaffold_12549_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7873..8235
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AWE8_RHOOB
Uncharacterized protein {ECO:0000313|EMBL:ETK36534.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_1_40cm_4_scaffold_12549_13
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(8200..9021)
DNA (822bp) protein (274aa)
Putative methyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7Y9_CALAS
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAM01377.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DS
13_1_40cm_4_scaffold_12549_14
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9033..9422
DNA (390bp) protein (130aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXS5_HALOH
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACL70094.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix
13_1_40cm_4_scaffold_12549_15
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9458..10264
DNA (807bp) protein (269aa)
Transporter, major facilitator family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMC6_STIAD
Major facilitator transporter {ECO:0000313|EMBL:KFA88762.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
transporter
13_1_40cm_4_scaffold_12549_16
Bacillus sp. JS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10209..10937)
DNA (729bp) protein (243aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Bacillus sp. JS RepID=I0EZH3_9BACI
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_1_40cm_4_scaffold_12549_17
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11212..12375)
DNA (1164bp) protein (388aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2T3_ANATU
hypothetical protein Tax=CG_Anaero_02
hypothetical protein
13_1_40cm_4_scaffold_12549_18
unknown

Not on your lists

12502..12852
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_12549_19
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(12849..13049)
DNA (201bp) protein (67aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA n=2 Tax=Dehalococcoides mccartyi RepID=A5FSU6_DEHSB
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=RBG_13_Chloroflexi_48_17_curated
13_1_40cm_4_scaffold_12549_20
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13127..14179)
DNA (1053bp) protein (351aa)
DNA repair protein RadA n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002D657BF
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 10776
13_1_40cm_4_scaffold_12549_21
unknown

Not on your lists

comp(14241..14900)
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_40cm_4_scaffold_12549_22
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14996..15598)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH90231.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
Displaying 22 items

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