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13_1_40cm_4_scaffold_1312

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1312_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..649)
DNA (648bp) protein (216aa)
ligJ; putative 4-oxalomesaconate hydratase; K10220 4-oxalmesaconate hydratase [EC:4.2.1.83] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000318BD20
ligJ; 4-oxalomesaconate hydratase
13_1_40cm_4_scaffold_1312_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(668..1615)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E13CE8
phtD; 4,5-dihydroxyphthalate decarboxylase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
phtD; 4,5-dihydroxyphthalate decarboxylase
13_1_40cm_4_scaffold_1312_3
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1612..2958)
DNA (1347bp) protein (449aa)
phthalate 4,5-dioxygenase (EC:1.14.12.7)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0DU28_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EPZ52966.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestr
13_1_40cm_4_scaffold_1312_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2976..4703)
DNA (1728bp) protein (576aa)
ABC-type Fe3+ transport system permease component; K02011 iron(III) transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ABC-type Fe3+ transport system permease component id=2117334 bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC Fe3+ siderophore transporter, inner membrane subunit
13_1_40cm_4_scaffold_1312_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4795..5358)
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:EZQ14289.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
13_1_40cm_4_scaffold_1312_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5912..7030)
DNA (1119bp) protein (373aa)
Putrescine transport ATP-binding protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ABC transporter ATP-binding protein id=2142598 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Putrescine transport ATP-binding protein
13_1_40cm_4_scaffold_1312_7
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7123..8418
DNA (1296bp) protein (432aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Beggiatoa sp. PS RepID=A7C0T5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD03515.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
TAXI family TRAP transporter solute receptor
13_1_40cm_4_scaffold_1312_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8403..9140)
DNA (738bp) protein (246aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7R7_9BRAD
ABC transporter {ECO:0000313|EMBL:KJB94312.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KA
putative branched-chain amino acid ABC transporter, ATP-binding protein
13_1_40cm_4_scaffold_1312_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9145..10338)
DNA (1194bp) protein (398aa)
Bll6906 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EZ5_BRADU
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
formyl-CoA transferase
13_1_40cm_4_scaffold_1312_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10335..10772)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000361EC01
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
13_1_40cm_4_scaffold_1312_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10792..11337)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA0539 RepID=UPI00031B7D33
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_1312_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11359..12330)
DNA (972bp) protein (324aa)
Putative ABC transport system, membrane protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VW50_9BURK
ABC transporter permease {ECO:0000313|EMBL:KJB94311.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
Inner-membrane translocator
13_1_40cm_4_scaffold_1312_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12327..13157)
DNA (831bp) protein (277aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7R5_9BRAD
Inner-membrane translocator Tax=RBG_16_Betaproteobacteria_64_18_curated
Inner-membrane translocator
13_1_40cm_4_scaffold_1312_14
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13186..14421)
DNA (1236bp) protein (412aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J3CG10_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB96798.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
Extracellular ligand-binding receptor
13_1_40cm_4_scaffold_1312_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14443..15606)
DNA (1164bp) protein (388aa)
fadE; acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWA2_Rokubacteria_73_35_curated
Acyl-CoA dehydrogenase id=5015980 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1312_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15653..16417
DNA (765bp) protein (255aa)
beta-lactamase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-lactamase family protein id=5015982 bin=GWA2_Methylomirabilis_73_35 species=Thiomicrospira crunogena genus=Thiomicrospira taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase domain-containing protein
13_1_40cm_4_scaffold_1312_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16451..17662
DNA (1212bp) protein (404aa)
amidohydrolase 2 Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Amidohydrolase 2 id=3780588 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative amidohydrolase 2
13_1_40cm_4_scaffold_1312_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17700..18320)
DNA (621bp) protein (207aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3E7R4_GEOS4
Uncharacterized protein {ECO:0000313|EMBL:KIC90487.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
phosphoesterase PA-phosphatase-like protein
13_1_40cm_4_scaffold_1312_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(18317..19048)
DNA (732bp) protein (244aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=5015987 bin=GWA2_Methylomirabilis_73_35 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1312_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19087..20451
DNA (1365bp) protein (455aa)
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4187612 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
MmgE/PrpD family protein
13_1_40cm_4_scaffold_1312_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20451..21644
DNA (1194bp) protein (398aa)
alpha-methylacyl-CoA racemase (EC:5.1.99.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4169030 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alpha-methylacyl-CoA racemase
13_1_40cm_4_scaffold_1312_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21651..22709)
DNA (1059bp) protein (353aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Patatin id=4226283 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1312_23
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

23075..23803
DNA (729bp) protein (243aa)
phosphotransferase domain-containing protein; K07053 Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Predicted metal-dependent phosphoesterase, PHP family id=8266615 bin=CD_OP8_4m species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
metal-dependent phosphoesterases (PHP family)
Displaying 23 items

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