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13_1_40cm_4_scaffold_1428

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1428_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1..447)
DNA (447bp) protein (149aa)
Cation/multidrug efflux pump; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14625839 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Cation/multidrug efflux pump; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_6_Rokubacteria
RND transporter
13_1_40cm_4_scaffold_1428_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1796..2173
DNA (378bp) protein (126aa)
id=4189587 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=4189587 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1428_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2174..2374
DNA (201bp) protein (67aa)
id=4189588 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=4189588 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_1428_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2726..3043
DNA (318bp) protein (106aa)
hypothetical protein RetlI_08615 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein RetlI_08615 id=4189589 bin=GWF2_Methylomirabilis_70_14 species=Rhizobium etli genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1428_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3105..4313)
DNA (1209bp) protein (403aa)
RND family efflux transporter MFP subunit id=14625838 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RND family efflux transporter MFP subunit Tax=CSP1_6_Rokubacteria
RND family efflux transporter MFP subunit
13_1_40cm_4_scaffold_1428_6
RLO_PLX_64_10, Bacteria

Not on your lists

4436..5446
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B805_9PSED
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_1_40cm_4_scaffold_1428_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5457..6335
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003179275
Uncharacterized protein {ECO:0000313|EMBL:ETW99478.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_4_scaffold_1428_8
unknown

Not on your lists

comp(6326..6550)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_1428_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6559..7566)
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97074.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Luciferase family protein id=4502441 bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like monooxygenase
13_1_40cm_4_scaffold_1428_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7601..8599)
DNA (999bp) protein (333aa)
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11) id=14425085 bin=bin1_lowGC species=Halopiger xanaduensis genus=Halopiger taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:ETW94700.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Luciferase-like monooxygenase
13_1_40cm_4_scaffold_1428_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8709..9290
DNA (582bp) protein (194aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGS2_ANADF
uracil-DNA glycosylase superfamily protein
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ABS27918.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxo
13_1_40cm_4_scaffold_1428_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9347..10534
DNA (1188bp) protein (396aa)
amidase; K01426 amidase [EC:3.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2II91_9PROT
glutamyl-tRNA(Gln) amidotransferase subunit A
13_1_40cm_4_scaffold_1428_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10883..11731)
DNA (849bp) protein (283aa)
amidase; K01426 amidase [EC:3.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidase (EC:3.5.1.4)
Amidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA12_SPHTD
13_1_40cm_4_scaffold_1428_14
unknown

Not on your lists

12335..12547
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_1428_15
unknown

Not on your lists

12516..12734
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_4_scaffold_1428_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12760..14109
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00038268FC
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
mmgE/PrpD family protein
13_1_40cm_4_scaffold_1428_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13995..14333)
DNA (339bp) protein (113aa)
hypothetical protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein; K02020 molybdate transport system substrate-binding protein
13_1_40cm_4_scaffold_1428_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14342..15691)
DNA (1350bp) protein (450aa)
pdhC; pyruvate dehydrogenase E2 component; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=GWA2_Rokubacteria_70_23_curated
Dihydrolipoyllysine-residue acetyltransferase id=4592706 bin=GWC2_Methylomirabilis_70_24 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dehydrogenase catalytic domain-containing protein
13_1_40cm_4_scaffold_1428_19
bacterium YEK0313, Bacteria

Not on your lists

comp(15707..16753)
DNA (1047bp) protein (349aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U174_9PROT
L-allo-threonine aldolase {ECO:0000313|EMBL:CEJ11409.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
13_1_40cm_4_scaffold_1428_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16759..17775)
DNA (1017bp) protein (339aa)
pyruvate dehydrogenase E1 component beta subunit; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=GWA2_Rokubacteria_73_35_curated
Transketolase central region id=3716780 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyruvate dehydrogenase E1 component beta subunit
13_1_40cm_4_scaffold_1428_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17794..19101
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQ22_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61550.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
type 11 methyltransferase
13_1_40cm_4_scaffold_1428_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19194..19769)
DNA (576bp) protein (192aa)
Putative uncharacterized protein id=4219817 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_1428_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20059..20226
DNA (168bp) protein (56aa)
Uncharacterized protein id=3716768 bin=GWA2_Methylomirabilis_73_35 species=Desulfurococcus fermentans genus=Desulfurococcus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_1428_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20223..20954)
DNA (732bp) protein (244aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4793461 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1428_25
unknown

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comp(20977..21288)
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_4_scaffold_1428_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21303..21620)
DNA (318bp) protein (106aa)
Beta-lactamase domain-containing protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CL65_SYNLT
beta-lactamase domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
beta-lactamase
13_1_40cm_4_scaffold_1428_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21617..22018)
DNA (402bp) protein (134aa)
Beta-lactamase like protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CHF0_9BURK
beta-lactamase domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
beta-lactamase
13_1_40cm_4_scaffold_1428_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22080..23141
DNA (1062bp) protein (354aa)
Amidohydrolase 2 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANB1_DELSC
amidohydrolase 2 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
amidohydrolase 2
13_1_40cm_4_scaffold_1428_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

23147..24739
DNA (1593bp) protein (531aa)
Drug resistance transporter, EmrB/QacA subfamily id=4748857 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B Tax=GWC2_Rokubacteria_70_16_curated
DSBA oxidoreductase
13_1_40cm_4_scaffold_1428_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

24870..25214
DNA (345bp) protein (115aa)
Methyltransferase, cyclopropane fatty acid synthase Tax=GWA2_Rokubacteria_70_23_curated
Methyltransferase, cyclopropane fatty acid synthase id=3523870 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Displaying items 1-30 of 37 in total

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