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13_1_40cm_4_scaffold_14987

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_14987_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..747)
DNA (747bp) protein (249aa)
putative phenylacetic acid degradation protein; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative phenylacetic acid degradation protein id=4527241 bin=GWF2_Methylomirabilis_70_14 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative phenylacetic acid degradation protein
13_1_40cm_4_scaffold_14987_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(779..2071)
DNA (1293bp) protein (431aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] id=14628064 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=CSP1_6_Rokubacteria
phenylacetate--CoA ligase (EC:6.2.1.30)
13_1_40cm_4_scaffold_14987_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2068..2370)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA91222.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_40cm_4_scaffold_14987_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2453..2713)
DNA (261bp) protein (87aa)
id=14628038 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14628038 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_14987_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2710..3870)
DNA (1161bp) protein (387aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=4745855 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_1_40cm_4_scaffold_14987_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3884..4387)
DNA (504bp) protein (168aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB id=4745854 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_14987_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4372..5679)
DNA (1308bp) protein (436aa)
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB id=4527233 bin=GWF2_Methylomirabilis_70_14 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA-i(6)A37 modification enzyme MiaB
13_1_40cm_4_scaffold_14987_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6052..6552)
DNA (501bp) protein (167aa)
hypothetical protein; K01622 fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fructose-1,6-bisphosphatase id=4745853 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_14987_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

7114..7332
DNA (219bp) protein (73aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_4_scaffold_14987_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7265..7465)
DNA (201bp) protein (67aa)
hypothetical protein; K01622 fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_14987_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7592..7738
DNA (147bp) protein (49aa)
DeoR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 11 items

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