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13_1_40cm_4_scaffold_2127

Search features with annotation key words

Displaying items 1-30 of 77 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2127_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..518
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_2 repeat-containing protein
13_1_40cm_4_scaffold_2127_2
unknown

Not on your lists

560..1267
DNA (708bp) protein (236aa)

This feature has no annotations

13_1_40cm_4_scaffold_2127_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1264..3081
DNA (1818bp) protein (606aa)
fadD; Long-chain acyl-CoA synthetase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
AMP-dependent synthetase and ligase
fadD; Long-chain acyl-CoA synthetase id=17241408 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_4_scaffold_2127_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3083..3469)
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_2127_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3670..5634)
DNA (1965bp) protein (655aa)
metallopeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
atm:ANT_23030 peptidase M23 family protein id=1246538 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Peptidase, M23/M37 family
13_1_40cm_4_scaffold_2127_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5639..6118)
DNA (480bp) protein (160aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G3_GEMAT
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHG90242.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2127_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6323..6979)
DNA (657bp) protein (219aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
GTP cyclohydrolase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G2_GEMAT
13_1_40cm_4_scaffold_2127_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7019..8242
DNA (1224bp) protein (408aa)
sodium/calcium exchanger membrane region; K07301 inner membrane protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
sodium/calcium exchanger membrane region; K07301 inner membrane protein id=14425893 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
sodium/calcium exchanger membrane region
13_1_40cm_4_scaffold_2127_9
unknown

Not on your lists

8493..8654
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_2127_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8709..9089)
DNA (381bp) protein (127aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88836.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2127_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9103..10281)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00036C89CF
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AHG89137.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2127_12
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

10648..11622
DNA (975bp) protein (325aa)
Uncharacterized protein Tax=RBG_16_Planctomycetes_55_9_curated
Uncharacterized protein id=1945956 bin=GWE2_Bacteroidetes_41_25 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
13_1_40cm_4_scaffold_2127_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11691..12920)
DNA (1230bp) protein (410aa)
Citrate transporter n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SA55_9CHLR
citrate transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
citrate transporter
13_1_40cm_4_scaffold_2127_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13045..14013)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F9_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
GCN5-related N-acetyltransferase
13_1_40cm_4_scaffold_2127_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13994..16423)
DNA (2430bp) protein (810aa)
Exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F7_GEMAT
SMC domain protein
SMC domain protein {ECO:0000313|EMBL:AHG90234.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2127_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16423..17619)
DNA (1197bp) protein (399aa)
Exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F6_GEMAT
exonuclease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Calcineurin-like phosphoesterase superfamily domain protein
13_1_40cm_4_scaffold_2127_17
unknown

Not on your lists

comp(17624..18331)
DNA (708bp) protein (236aa)

This feature has no annotations

13_1_40cm_4_scaffold_2127_18
unknown

Not on your lists

18622..20541
DNA (1920bp) protein (640aa)

This feature has no annotations

13_1_40cm_4_scaffold_2127_19
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(20448..21458)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000344AFEB
hypothetical protein Tax=RBG_16_Armatimonadetes_58_9_curated
hypothetical protein
13_1_40cm_4_scaffold_2127_20
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21461..22195)
DNA (735bp) protein (245aa)
ubiquinone biosynthesis O-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacte
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI000381C0CF
13_1_40cm_4_scaffold_2127_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22266..22619)
DNA (354bp) protein (118aa)
S23 ribosomal protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
S23 ribosomal protein id=5032364 bin=GWA2_Elusimicrobia_51_34 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
S23 ribosomal protein
13_1_40cm_4_scaffold_2127_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22742..23257)
DNA (516bp) protein (172aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_2127_23
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

23687..24511
DNA (825bp) protein (275aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
Proline dipeptidase id=8266084 bin=CD_OP8_4m species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
peptidase M24
13_1_40cm_4_scaffold_2127_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24584..25777)
DNA (1194bp) protein (398aa)
aspC; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F2_GEMAT
13_1_40cm_4_scaffold_2127_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25946..27232
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
DbpA RNA-binding domain protein
13_1_40cm_4_scaffold_2127_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27287..28255)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC83_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40110.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_2127_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28387..28674)
DNA (288bp) protein (96aa)
DNA-binding protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S441_BUTPB
hup; DNA-binding protein Hup Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-binding protein
13_1_40cm_4_scaffold_2127_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

28880..29428
DNA (549bp) protein (183aa)
tdk; thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Thymidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F0_GEMAT
Thymidine kinase
13_1_40cm_4_scaffold_2127_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

29513..30514
DNA (1002bp) protein (334aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E7_GEMAT
13_1_40cm_4_scaffold_2127_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

30578..30967
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E6_GEMAT
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gcvH; glycine cleavage system H protein
Displaying items 1-30 of 77 in total

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