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13_1_40cm_4_scaffold_2292

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2292_1
unknown

Not on your lists

comp(3..647)
DNA (645bp) protein (215aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_2
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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957..1970
DNA (1014bp) protein (338aa)
Uncharacterized protein n=3 Tax=Sulfolobus acidocaldarius RepID=M1IFL7_9CREN
ArsR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AGE74188.1}; TaxID=1028567 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus acidocaldarius Ron12/I
13_1_40cm_4_scaffold_2292_3
unknown

Not on your lists

2075..2617
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_4
unknown

Not on your lists

2754..3032
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_5
unknown

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3033..3320
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_6
unknown

Not on your lists

3574..3843
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4005..4430)
DNA (426bp) protein (142aa)
source missing description 7..119 id=1245680 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_2292_8
unknown

Not on your lists

4616..5215
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_9
unknown

Not on your lists

comp(5274..5936)
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6175..8115)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJI6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60175.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2292_11

Not on your lists

comp(8243..9313)
DNA (1071bp) protein (357aa)
Putative methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.2
mtnA; translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Putative methylthioribose-1-phosphate isomerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHQ3_NITGG
13_1_40cm_4_scaffold_2292_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

9384..9965
DNA (582bp) protein (194aa)
tRNA-splicing endonuclease subunit beta; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_16_Archaea_50_20_curated
tRNA intron endonuclease n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2G4_9ARCH
tRNA intron endonuclease, catalytic domain-containing protein
13_1_40cm_4_scaffold_2292_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


9978..11294
DNA (1317bp) protein (439aa)
hisS; histidine--tRNA ligase (EC:6.1.1.21) Tax=RBG_16_Archaea_50_20_curated
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGR5_NITGG
13_1_40cm_4_scaffold_2292_14
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

11475..12155
DNA (681bp) protein (227aa)
Chorismate synthase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5STN4_9BACT
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
13_1_40cm_4_scaffold_2292_15
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

12165..13274
DNA (1110bp) protein (370aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
O-succinylbenzoate synthase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SF69_9BACT
menC; O-succinylbenzoate synthase
13_1_40cm_4_scaffold_2292_16
unknown

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13341..13607
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_17
unknown

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comp(13640..14494)
DNA (855bp) protein (285aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_18
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14697..15212)
DNA (516bp) protein (172aa)
ABC transporter ATP-binding protein permease n=1 Tax=Pyrococcus sp. ST04 RepID=I3RGI3_9EURY
ABC transporter ATP-binding protein permease
Tax=BJP_IG2158_Thermoplasmatales_53_16
13_1_40cm_4_scaffold_2292_19
Aeropyrum camini, Aeropyrum, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(15526..16065)
DNA (540bp) protein (180aa)
ABC transporter permease n=1 Tax=Aeropyrum camini SY1 = JCM 12091 RepID=U3TBY6_9CREN
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:BAN91052.1}; TaxID=1198449 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum.;" source="Aeropyrum camini SY1 =
13_1_40cm_4_scaffold_2292_20
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(16347..17378)
DNA (1032bp) protein (344aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZT4_ANATU
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAJ62269.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolin
13_1_40cm_4_scaffold_2292_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(17452..17877)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIT9_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_2292_22
unknown

Not on your lists

17958..18182
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(18185..18979)
DNA (795bp) protein (265aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_2292_24
unknown

Not on your lists

comp(19070..19519)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_4_scaffold_2292_trna_1
unknown

Not on your lists

19141..19270
DNA (130bp)
transferRNA
13_1_40cm_4_scaffold_2292_25
Pyrobaculum arsenaticum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

19530..20120
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) RepID=A4WKG4_PYRAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP50881.1}; TaxID=340102 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum arsenaticum (st
13_1_40cm_4_scaffold_2292_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20149..21399)
DNA (1251bp) protein (417aa)
sodium/calcium exchanger membrane region; K07301 inner membrane protein Tax=RBG_16_Acidobacteria_70_10_curated
sodium/calcium exchanger membrane region; K07301 inner membrane protein id=14425893 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
sodium/calcium exchanger membrane region
13_1_40cm_4_scaffold_2292_27
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21635..22768
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBE3_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25101.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="
13_1_40cm_4_scaffold_2292_28
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

23033..23944
DNA (912bp) protein (304aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RK58_METP4
corA; magnesium Mg(2+) and cobalt Co(2+) transport protein CorA
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="T
13_1_40cm_4_scaffold_2292_29
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(24338..25000)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N13 RepID=UPI000366A893
Uncharacterized protein Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein
Displaying items 1-30 of 40 in total

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