ggKbase home page

13_1_40cm_4_scaffold_2553

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2553_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2001)
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P5R8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX59810.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_40cm_4_scaffold_2553_2
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1998..2765)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CNP5_MYXFH
Uncharacterized protein {ECO:0000313|EMBL:KFA89134.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_40cm_4_scaffold_2553_3
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2777..3883)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GMH5_9NEIS
hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO43126.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
13_1_40cm_4_scaffold_2553_4
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3883..4680)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CNP8_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI64065.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_1_40cm_4_scaffold_2553_5
unknown

Not on your lists

5169..5369
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_2553_6
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5512..6249)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HI45_BURVI
Uncharacterized protein {ECO:0000313|EMBL:KEZ04224.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
hypothetical protein
13_1_40cm_4_scaffold_2553_7
Neisseria shayeganii, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6246..7283)
DNA (1038bp) protein (346aa)
Rieske family iron-sulfur cluster-binding protein n=1 Tax=Neisseria shayeganii 871 RepID=G4CGH2_9NEIS
Rieske family iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EGY53084.1}; TaxID=1032488 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="
iron-sulfur cluster-binding protein Rieske family
13_1_40cm_4_scaffold_2553_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7274..8137)
DNA (864bp) protein (288aa)
Fatty acid desaturase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B185_TURPD
alkanal monooxygenase
Beta-carotene hydroxylase {ECO:0000313|EMBL:EYF05310.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondr
13_1_40cm_4_scaffold_2553_9
unknown

Not on your lists

comp(8134..8376)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_2553_10
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8644..9987
DNA (1344bp) protein (448aa)
Putative sigma54 specific transcriptional regulator n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJV5_SYNLT
sigma54 specific transcriptional regulator
Putative sigma54 specific transcriptional regulator {ECO:0000313|EMBL:ADI01069.1}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" sourc
13_1_40cm_4_scaffold_2553_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10027..10578)
DNA (552bp) protein (184aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
gas vesicle protein GvpA
Gas vesicle structural protein {ECO:0000255|HAMAP-Rule:MF_00576}; Short=GVP {ECO:0000255|HAMAP-Rule:MF_00576};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
13_1_40cm_4_scaffold_2553_12
bacterium UASB270, Bacteria

Not on your lists

comp(10590..12800)
DNA (2211bp) protein (737aa)
Molybdopterin oxidoreductase {ECO:0000313|EMBL:GAK58849.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Molybdopterin oxidoreductase id=4889170 bin=GWC2_Syntrophobacterales_56_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE
13_1_40cm_4_scaffold_2553_13
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

13672..14103
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5SXI5_9PLAN
hypothetical protein Tax=CG_Elusi_04
hypothetical protein
13_1_40cm_4_scaffold_2553_14
unknown

Not on your lists

14100..14276
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_2553_15
unknown

Not on your lists

comp(14300..14539)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_4_scaffold_2553_16
unknown

Not on your lists

comp(14544..15080)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_4_scaffold_2553_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

15293..17416
DNA (2124bp) protein (708aa)
CoA-binding domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C154_SPHTD
CoA-binding domain-containing protein
CoA-binding domain protein {ECO:0000313|EMBL:ACZ37971.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" so
13_1_40cm_4_scaffold_2553_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17455..18327
DNA (873bp) protein (291aa)
Putative enoyl-CoA hydratase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F4A6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETX05786.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
enoyl-CoA hydratase
13_1_40cm_4_scaffold_2553_19

Not on your lists

18324..19865
DNA (1542bp) protein (514aa)
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_4_scaffold_2553_20
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19874..20452
DNA (579bp) protein (193aa)
metal dependent phosphohydrolase; K08722 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
5'-deoxynucleotidase Shew_1913 n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QE81_SHELP
hypothetical protein
13_1_40cm_4_scaffold_2553_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20534..20713)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000377B1C0
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_4_scaffold_2553_trna_1
unknown

Not on your lists

comp(20851..20923)
DNA (73bp)
transferRNA
Displaying 22 items

View Taxonomy