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13_1_40cm_4_scaffold_2668

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2668_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1791
DNA (1791bp) protein (597aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037DE088
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
13_1_40cm_4_scaffold_2668_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1805..2848
DNA (1044bp) protein (348aa)
Deoxyribose-phosphate aldolase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THL1_9CHLR
deoxyribose-phosphate aldolase
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:AHG90560.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2668_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2850..5216
DNA (2367bp) protein (789aa)
Putative aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C6_GEMAT
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90561.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2668_4
unknown

Not on your lists

comp(5258..5434)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_2668_5
unknown

Not on your lists

comp(5508..5888)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_40cm_4_scaffold_2668_trna_2
unknown

Not on your lists

comp(6060..6133)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_2668_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(6214..6846)
DNA (633bp) protein (211aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPQ9_9FIRM
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
13_1_40cm_4_scaffold_2668_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6843..7322)
DNA (480bp) protein (160aa)
Bifunctional protein HldE n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GTQ0_9GAMM
bifunctional ADP-heptose synthase Tax=GWC2_Gemmatimonadetes_71_10_curated
D-heptose-7-phosphate 1-kinase,D-heptose-1-phosphate adenylyltransferase
13_1_40cm_4_scaffold_2668_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8608..8979)
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_2668_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8973..9509)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Rare lipoprotein B
13_1_40cm_4_scaffold_2668_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10229..10597)
DNA (369bp) protein (123aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Deinococcus wulumuqiensis RepID=UPI0003723B9F
hypothetical protein
13_1_40cm_4_scaffold_2668_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10721..11437
DNA (717bp) protein (239aa)
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=RBG_16_Gemmatimonadetes_66_8_curated
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=24407690 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Calcineurin-like phosphoesterase superfamily domain protein
13_1_40cm_4_scaffold_2668_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11457..12257)
DNA (801bp) protein (267aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate racemase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ANV7_PELPD
Glutamate racemase
13_1_40cm_4_scaffold_2668_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12254..12760)
DNA (507bp) protein (169aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_2668_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12757..13641)
DNA (885bp) protein (295aa)
Diacylglycerol kinase catalytic region n=2 Tax=Chloroflexus RepID=A9WJK5_CHLAA
diacylglycerol kinase catalytic subunit; K07029 Tax=GWC2_Gemmatimonadetes_71_10_curated
diacylglycerol kinase catalytic subunit
13_1_40cm_4_scaffold_2668_15
unknown

Not on your lists

comp(13730..14113)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_4_scaffold_2668_16
unknown

Not on your lists

comp(14128..14577)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_4_scaffold_2668_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14763..15809)
DNA (1047bp) protein (349aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate semialdehyde dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF1_CHLTF
13_1_40cm_4_scaffold_2668_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15932..16852
DNA (921bp) protein (307aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WVD9_ALIAD
Homoserine kinase
13_1_40cm_4_scaffold_2668_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16857..19376
DNA (2520bp) protein (840aa)
aspartokinase/homoserine dehydrogenase (EC:1.1.1.3 2.7.2.4)
Aspartokinase/homoserine dehydrogenase {ECO:0000313|EMBL:BAH38409.1}; EC=1.1.1.3 {ECO:0000313|EMBL:BAH38409.1};; EC=2.7.2.4 {ECO:0000313|EMBL:BAH38409.1};; TaxID=379066 species="Bacteria; Gemmatimonad
Aspartokinase/homoserine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A849_GEMAT
13_1_40cm_4_scaffold_2668_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19373..20689
DNA (1317bp) protein (439aa)
Threonine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A850_GEMAT
threonine synthase
Threonine synthase {ECO:0000313|EMBL:AHG89128.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2668_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20699..21049)
DNA (351bp) protein (117aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_2668_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21128..22186)
DNA (1059bp) protein (353aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_2668_trna_1
unknown

Not on your lists

comp(22528..22617)
DNA (90bp)
transferRNA
13_1_40cm_4_scaffold_2668_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22673..23074
DNA (402bp) protein (134aa)
PAS/PAC sensor signal transduction histidine kinase/response regulator n=1 Tax=Dehalococcoides mccartyi DCMB5 RepID=M1Q0L7_9CHLR
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
PAS/PAC sensor signal transduction histidine kinase/response regulator
13_1_40cm_4_scaffold_2668_24
unknown

Not on your lists

comp(23078..24553)
DNA (1476bp) protein (492aa)

This feature has no annotations

13_1_40cm_4_scaffold_2668_25
unknown

Not on your lists

comp(24550..25833)
DNA (1284bp) protein (428aa)

This feature has no annotations

13_1_40cm_4_scaffold_2668_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25883..27310)
DNA (1428bp) protein (476aa)
Peptidase M20 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AW5_SOLUE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_2668_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27307..27699)
DNA (393bp) protein (131aa)
Translation initiation inhibitor n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=A6Q4D5_NITSB
endoribonuclease l-psp; K07567 TdcF protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
translation initiation inhibitor
13_1_40cm_4_scaffold_2668_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27699..29381)
DNA (1683bp) protein (561aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE57_GEMAT
Displaying items 1-30 of 32 in total

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