name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_4_scaffold_274_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(1..483)
|
ABC transporter, ATP-binding protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F6G4_9DELT
livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
amino acid ABC transporter ATP-binding protein
|
|
13_1_40cm_4_scaffold_274_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(470..2122)
|
putative ABC transporter permiase component id=14626607 bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
putative ABC transporter permiase component Tax=CSP1_6_Rokubacteria
ABC transporter-like protein
|
|
13_1_40cm_4_scaffold_274_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(2124..3038)
|
putative Branched-chain amino acid ABC transporter (permease protein); livH-like protein id=14626606 bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative Branched-chain amino acid ABC transporter (permease protein); livH-like protein Tax=CSP1_6_Rokubacteria
hypothetical protein
|
|
13_1_40cm_4_scaffold_274_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(3002..4276)
|
putative Leu/Ile/Val-binding protein homolog 8 id=14626605 bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative Leu/Ile/Val-binding protein homolog 8 Tax=CSP1_6_Rokubacteria
putative Leu/Ile/Val-binding protein homolog 8
|
|
13_1_40cm_4_scaffold_274_5
unknown
|
Not on your lists |
comp(4347..4772)
|
This feature has no annotations |
|
13_1_40cm_4_scaffold_274_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
4809..5354
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14626604 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
|
|
13_1_40cm_4_scaffold_274_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(5351..5785)
|
MaoC-like dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl dehydratase id=2783141 bin=GWF2_Methylomirabilis_70_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MaoC-like dehydratase
|
|
13_1_40cm_4_scaffold_274_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(5799..6254)
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
MaoC-like dehydratase id=2783137 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MaoC-like dehydratase
|
|
13_1_40cm_4_scaffold_274_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(6259..6654)
|
thioesterase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Thioesterase superfamily protein id=2783134 bin=GWF2_Methylomirabilis_70_14 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
|
13_1_40cm_4_scaffold_274_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(6666..7340)
|
hypothetical protein; K07090 Tax=GWC2_Rokubacteria_70_16_curated
Putative membrane protein id=4911921 bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
|
|
13_1_40cm_4_scaffold_274_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
7360..8532
|
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
EmrB/QacA family drug resistance transporter id=14625974 bin=bin7_NC10_sister species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator superfamily transporter
|
|
13_1_40cm_4_scaffold_274_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
8602..9639
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626596 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
|
|
13_1_40cm_4_scaffold_274_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
9636..9917
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4905363 bin=GWA2_Methylomirabilis_73_35 species=Saccharomonospora marina genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
|
13_1_40cm_4_scaffold_274_14
R_Rokubacteria_69_13, Rokubacteria, Bacteria
|
Not on your lists |
9939..10166
|
Uncharacterized protein id=4905364 bin=GWA2_Methylomirabilis_73_35 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
|
|
13_1_40cm_4_scaffold_274_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
10397..11197
|
hypothetical protein; K07019 Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein; K07019 id=14626593 bin=bin7_NC10_sister species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase fold protein
|
|
13_1_40cm_4_scaffold_274_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
11199..12506
|
fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (EC:5.2.1.8)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036FA4B3
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
|
|
13_1_40cm_4_scaffold_274_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
12503..13135
|
ushA; 5'-nucleotidase (EC:3.1.3.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5'-nucleotidase id=4178156 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative 5`-nucleotidase
|
|
13_1_40cm_4_scaffold_274_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
13147..14022
|
ushA; 5'-nucleotidase (EC:3.1.3.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ushA; 5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase n=1 Tax=uncultured prokaryote RepID=H5SKN9_9ZZZZ
|
|
13_1_40cm_4_scaffold_274_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
14257..14634
|
Two component transcriptional regulator id=4905366 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two component transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
|
|
13_1_40cm_4_scaffold_274_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(14768..15712)
|
Peptide ABC transporter membrane protein id=4905398 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
peptide ABC transporter permease
|
|
13_1_40cm_4_scaffold_274_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15712..16671)
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM10_METNO
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
binding-protein-dependent transport system inner membrane protein
|
|
13_1_40cm_4_scaffold_274_22
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16751..18547)
|
peptide ABC transporter substrate-binding protein (EC:3.6.3.24)
Peptide ABC transporter substrate-binding protein id=4797023 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptide ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
|
|
13_1_40cm_4_scaffold_274_23
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18618..20414)
|
Peptide ABC transporter substrate-binding protein id=4797023 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptide ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
peptide ABC transporter substrate-binding protein
|
|
13_1_40cm_4_scaffold_274_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
20623..21279
|
resA; thiol-disulfide oxidoreductase ResA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Thiol-disulfide oxidoreductase id=3666472 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
resA; thiol-disulfide oxidoreductase resA
|
|
13_1_40cm_4_scaffold_274_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
21276..22016
|
ccdA; cytochrome c biogenesis protein CcdA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cytochrome c biogenesis protein CcdA id=3666473 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccdA; cytochrome c biogenesis protein CcdA
|
|
13_1_40cm_4_scaffold_274_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
22021..22923
|
homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Homoserine kinase id=3666474 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
homoserine kinase
|
|
13_1_40cm_4_scaffold_274_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
22972..24171
|
Major facilitator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Major facilitator id=1801598 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Major facilitator
|
|
13_1_40cm_4_scaffold_274_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
24205..25353
|
dcd; 2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dcd; 2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13)
2'-deoxycytidine 5'-triphosphate deaminase id=3666475 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_4_scaffold_274_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
25416..25616
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Prokaryotic ubiquitin-like protein Pup id=4797071 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
|
|
13_1_40cm_4_scaffold_274_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
25618..25827
|
Regulatory protein, FmdB family n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30Y30_DESDG
FmdB family regulatory protein Tax=GWA2_Rokubacteria_73_35_curated
FmdB family regulatory protein
|