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13_1_40cm_4_scaffold_299

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_299_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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186..596
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX04735.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_4_scaffold_299_2
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(610..780)
DNA (171bp) protein (57aa)
ABC transporter n=1 Tax=Anoxybacillus flavithermus AK1 RepID=M8DLZ1_9BACI
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
inner-membrane translocator
13_1_40cm_4_scaffold_299_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(790..1521)
DNA (732bp) protein (244aa)
ABC transporter related n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIP4_ANADF
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABS28590.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_299_4
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1508..2275)
DNA (768bp) protein (256aa)
ABC transporter related n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEI8_METS4
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACA16728.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
13_1_40cm_4_scaffold_299_5

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comp(2250..3101)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL25824.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=3566005 bin=GWC2_ACD39_50_8 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
branched-chain amino acid abc transporter permease protein
13_1_40cm_4_scaffold_299_6
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3071..3931)
DNA (861bp) protein (287aa)
Branched-chain amino acid ABC-type transport system, permease components n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZP0_PELTS
LivH; branched-chain amino acid ABC-type transport system, permease components
Branched-chain amino acid ABC-type transport system, permease components {ECO:0000313|EMBL:BAF60531.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomac
13_1_40cm_4_scaffold_299_7
unknown

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3994..4137
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_4_scaffold_299_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4152..5330
DNA (1179bp) protein (393aa)
Branched-chain amino acid abc transporter, amino acid-binding protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TAN0_HELMI
branched-chain amino acid abc transporter amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
branched-chain amino acid abc transporter amino acid-binding protein
13_1_40cm_4_scaffold_299_9
unknown

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5337..5441
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_4_scaffold_299_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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5438..6814
DNA (1377bp) protein (459aa)
coenzyme A ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
coenzyme A ligase (EC:6.2.1.30)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI00036C5B0F
13_1_40cm_4_scaffold_299_11
unknown

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6811..6993
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_4_scaffold_299_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6990..8318
DNA (1329bp) protein (443aa)
peptidase M20 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase M20 family protein id=4911971 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M20
13_1_40cm_4_scaffold_299_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8495..8965
DNA (471bp) protein (157aa)
Putative uncharacterized protein id=4646422 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_299_14
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8997..9722
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037D4C08
nucleoside phosphorylase
Nucleoside phosphorylase {ECO:0000313|EMBL:AFY97024.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
13_1_40cm_4_scaffold_299_15
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

9719..10102
DNA (384bp) protein (128aa)
hypothetical protein id=1247387 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_1_40cm_4_scaffold_299_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10131..10679
DNA (549bp) protein (183aa)
Putative acetyltransferase protein id=2497913 bin=GWC2_Methylomirabilis_70_24 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
N-acetyltransferase GCN5 Tax=GWA2_Rokubacteria_70_23_curated
GCN5 family N-acetyltransferase
13_1_40cm_4_scaffold_299_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10576..12099)
DNA (1524bp) protein (508aa)
NADH:flavin oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
NADH:flavin oxidoreductase/NADH oxidase id=4048083 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADH:flavin oxidoreductase
13_1_40cm_4_scaffold_299_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12104..12520)
DNA (417bp) protein (139aa)
Endoribonuclease L-PSP id=4048084 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative endoribonuclease, translation initiation inhibitor (modular protein) Tax=GWA2_Rokubacteria_73_35_curated
putative endoribonuclease
13_1_40cm_4_scaffold_299_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12599..13366)
DNA (768bp) protein (256aa)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase id=4048086 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-[acyl-carrier-protein] reductase Tax=GWA2_Rokubacteria_73_35_curated
short-chain dehydrogenase
13_1_40cm_4_scaffold_299_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13600..14868
DNA (1269bp) protein (423aa)
acetyl-CoA hydrolase (EC:2.8.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetyl-CoA hydrolase/transferase id=4895019 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA hydrolase/transferase
13_1_40cm_4_scaffold_299_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14858..15028)
DNA (171bp) protein (57aa)
id=3968019 Tax=GWA2_Rokubacteria_70_23_curated
id=14627911 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_299_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15153..16082
DNA (930bp) protein (310aa)
rih; inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
inosine-uridine preferring nucleoside hydrolase Tax=GWA2_Rokubacteria_73_35_curated
Inosine-uridine preferring nucleoside hydrolase id=3968020 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_299_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16046..17002
DNA (957bp) protein (319aa)
rbsK; ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribokinase id=4048097 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia multivorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribokinase
13_1_40cm_4_scaffold_299_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17030..18139)
DNA (1110bp) protein (370aa)
glycosyl hydrolase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] id=14627915 bin=bin7_NC10_sister species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
glycosyl hydrolase
13_1_40cm_4_scaffold_299_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18117..18899)
DNA (783bp) protein (261aa)
photosystem I assembly BtpA; K06971 Tax=GWA2_Rokubacteria_73_35_curated
Photosystem I assembly BtpA id=4048103 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
btpA; photosystem I assembly BtpA
13_1_40cm_4_scaffold_299_26
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

18923..19417
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003456DB9
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_40cm_4_scaffold_299_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19485..20777)
DNA (1293bp) protein (431aa)
general secretion pathway protein D; K02453 general secretion pathway protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein D id=4806967 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 27 items

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