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13_1_40cm_4_scaffold_3157

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3157_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1299)
DNA (1299bp) protein (433aa)
putative cytochrome c Tax=GWA2_Rokubacteria_73_35_curated
Hypothetical (Diheme) protein id=4083687 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative cytochrome c
13_1_40cm_4_scaffold_3157_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1507..1794)
DNA (288bp) protein (96aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative (Diheme) protein id=4083690 bin=GWA2_Methylomirabilis_73_35 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_3157_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2251..3048)
DNA (798bp) protein (266aa)
Hypothetical (Diheme) protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hypothetical (Diheme) protein id=4083692 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_3157_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3050..4846)
DNA (1797bp) protein (599aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4083694 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_3157_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4987..5775
DNA (789bp) protein (263aa)
ftsH; cell division protein FtsH (EC:3.4.24.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ftsH; cell division protein FtsH (EC:3.4.24.-) id=14627774 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
13_1_40cm_4_scaffold_3157_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5741..6886
DNA (1146bp) protein (382aa)
ftsH; cell division protein FtsH (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ftsH; cell division protein FtsH (EC:3.4.24.-) id=14627774 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
13_1_40cm_4_scaffold_3157_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6883..8367
DNA (1485bp) protein (495aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
trypsin domain/PDZ domain-containing protein; K01362 [EC:3.4.21.-] id=14627773 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
degP; periplasmic trypsin-like serine protease DegP
13_1_40cm_4_scaffold_3157_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8494..9525
DNA (1032bp) protein (344aa)
chaperone DnaJ domain-containing protein; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chaperone protein DnaJ id=4428160 bin=GWC2_Methylomirabilis_70_24 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
chaperone protein dnaJ
13_1_40cm_4_scaffold_3157_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9563..12160
DNA (2598bp) protein (866aa)
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=14628005 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
ATP-dependent chaperone ClpB
13_1_40cm_4_scaffold_3157_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12441..14219)
DNA (1779bp) protein (593aa)
gamma-glutamyltranspeptidase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative gamma-glutamyltranspeptidase id=2304933 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gamma-glutamyltranspeptidase
13_1_40cm_4_scaffold_3157_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14282..15025
DNA (744bp) protein (248aa)
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted glutamine amidotransferases Tax=GWA2_Rokubacteria_73_35_curated
glutamine amidotransferase
13_1_40cm_4_scaffold_3157_12
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15042..15458)
DNA (417bp) protein (139aa)
Type I secretion target GGXGXDXXX repeat protein domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WP05_9SYNE
Type I secretion target GGXGXDXXX repeat protein domain protein {ECO:0000313|EMBL:EDX85895.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" sour
13_1_40cm_4_scaffold_3157_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15680..16483)
DNA (804bp) protein (268aa)
metallo-beta-lactamase family-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Metallo-beta-lactamase superfamily protein id=3813271 bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
blaB; metallo-beta-lactamase family protein
13_1_40cm_4_scaffold_3157_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16548..17249)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMR8_BRAJP
putative branched-chain amino acid ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_3157_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17249..18004)
DNA (756bp) protein (252aa)
Branched-chain amino acid ABC transporter,ATP-binding component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIU8_AZOBR
branched-chain amino acid ABC transporter,ATP-binding component Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
branched-chain amino acid ABC transporter,ATP-binding component
13_1_40cm_4_scaffold_3157_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(17997..18941)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI000378F703
putative branched-chain amino acid ABC transporter, permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
branched-chain amino acid ABC transporter permease
13_1_40cm_4_scaffold_3157_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(18941..19867)
DNA (927bp) protein (309aa)
Putative branched-chain amino acid ABC transporter, permease protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4Z2M4_BRASO
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
branched-chain amino acid ABC transporter permease
13_1_40cm_4_scaffold_3157_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(19959..21080)
DNA (1122bp) protein (374aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030AB042
conserved exported hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter binding protein
13_1_40cm_4_scaffold_3157_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(21247..21666)
DNA (420bp) protein (140aa)
putative 4-hydroxybenzoyl-CoA thioesterase; K01075 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
4-hydroxybenzoyl-CoA thioesterase id=4401184 bin=GWC2_Methylomirabilis_70_24 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
4-hydroxybenzoyl-CoA thioesterase
13_1_40cm_4_scaffold_3157_20
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(21702..23006)
DNA (1305bp) protein (435aa)
Gll0875 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM92_GLOVI
HlyD family multidrug efflux protein
Gll0875 protein {ECO:0000313|EMBL:BAC88816.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_1_40cm_4_scaffold_3157_21
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(22999..23406)
DNA (408bp) protein (136aa)
Gll0876 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM91_GLOVI
AcrB/AcrD/AcrF family multidrug efflux protein
Gll0876 protein {ECO:0000313|EMBL:BAC88817.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
Displaying 21 items

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