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13_1_40cm_4_scaffold_3357

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3357_1
unknown

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comp(306..530)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_3357_2
unknown

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1077..1979
DNA (903bp) protein (301aa)

This feature has no annotations

13_1_40cm_4_scaffold_3357_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2516..3199
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJC3_THEBM
hypothetical protein containing KaiC-domain Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein containing KaiC-domain
13_1_40cm_4_scaffold_3357_4
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3392..4651
DNA (1260bp) protein (420aa)
Proteasome-activating nucleotidase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=PAN_THEKO
proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000255|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000255|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000255|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
13_1_40cm_4_scaffold_3357_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4697..5542
DNA (846bp) protein (282aa)
NAD+ synthetase (EC:6.3.1.5); K01916 NAD+ synthase [EC:6.3.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
NAD synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=NADE_HYPBU
13_1_40cm_4_scaffold_3357_6
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5902..6309)
DNA (408bp) protein (136aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KP51_9FIRM
putative nucleic-acid-binding protein containing a Zn-ribbon
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:AGL01411.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" s
13_1_40cm_4_scaffold_3357_7
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(6314..7219)
DNA (906bp) protein (302aa)
Putative uncharacterized protein PH0309 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58047_PYRHO
hypothetical protein
Putative uncharacterized protein PH0309 {ECO:0000313|EMBL:BAA29382.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horik
13_1_40cm_4_scaffold_3357_8
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7287..8441)
DNA (1155bp) protein (385aa)
Acetyl-CoA acetyltransferase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C5V0_DESTA
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFM24941.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomon
13_1_40cm_4_scaffold_3357_9
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8541..8849)
DNA (309bp) protein (103aa)
Ethyl tert-butyl ether degradation EthD n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9G8_9BACI
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:EGL81955.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus th
ethyl tert-butyl ether degradation EthD
13_1_40cm_4_scaffold_3357_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(8864..9868)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036D6CCD
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_3357_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(9935..10729)
DNA (795bp) protein (265aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17); K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] Tax=RBG_16_Archaea_50_20_curated
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase Enoyl-CoA hydratase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJX9_THEM7
13_1_40cm_4_scaffold_3357_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(10733..11506)
DNA (774bp) protein (258aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17); K01692 enoyl-CoA hydratase [EC:4.2.1.17] Tax=RBG_16_Archaea_50_20_curated
paaF; enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000378A9E8
13_1_40cm_4_scaffold_3357_13
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(11558..12412)
DNA (855bp) protein (285aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157 1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AIG97252.1}; EC=1.1.1.157 {ECO:0000313|EMBL:AIG97252.1};; EC=1.1.1.35 {ECO:0000313|EMBL:AIG97252.1};; TaxID=1344584 species="Archaea; Euryarchaeota; A
3-hydroxyacyl-CoA dehydrogenase (Hbd-3) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29815_ARCFU
13_1_40cm_4_scaffold_3357_14
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12452..12946)
DNA (495bp) protein (165aa)
Acyl-CoA thioester hydrolase (EC:3.1.2.-) Tax=GWA2_Deltaproteobacteria_65_63_curated
Thioesterase superfamily protein id=2274807 bin=GWB2_Deltaproteobacteria_65_81 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
acyl-CoA hydrolase
13_1_40cm_4_scaffold_3357_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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13144..13503
DNA (360bp) protein (120aa)
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=14425400 bin=bin1_lowGC species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=CSP1_2_Dadabacteria
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.26)
13_1_40cm_4_scaffold_3357_16
unknown

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comp(14019..14171)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_4_scaffold_3357_17
unknown

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comp(14250..15152)
DNA (903bp) protein (301aa)

This feature has no annotations

13_1_40cm_4_scaffold_3357_18

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16522..18546
DNA (2025bp) protein (675aa)
Pyrrolo-quinoline quinone n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RD00_METP4
WD40 repeat protein {ECO:0000313|EMBL:ESS08019.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
pyrrolo-quinoline quinone
13_1_40cm_4_scaffold_3357_19
unknown

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18583..19011
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_4_scaffold_3357_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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19185..20318
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9Z1_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_4_scaffold_3357_21
unknown

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20331..20720
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_3357_22

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comp(20952..21350)
DNA (399bp) protein (133aa)
methionyl aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9Z2_9ARCH
Marine sediment metagenome DNA, contig: S03H2_C04442 {ECO:0000313|EMBL:GAH20518.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_4_scaffold_3357_23
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(21936..22184)
DNA (249bp) protein (83aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000255|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00140}; Short=TrpRS {ECO:0000255|HAMAP
Tryptophan--tRNA ligase n=3 Tax=Sulfolobus acidocaldarius RepID=SYW_SULAC
Displaying 23 items

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