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13_1_40cm_4_scaffold_372

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_372_1
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

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55..765
DNA (711bp) protein (237aa)
demethylmenaquinone methyltransferase / 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3Q9_9BACT
ubiquinone/menaquinone biosynthesis methyltransferase Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
13_1_40cm_4_scaffold_372_2

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comp(839..2086)
DNA (1248bp) protein (416aa)
Major facilitator superfamily protein n=1 Tax=uncultured bacterium RepID=J7GNJ9_9BACT
Major facilitator superfamily permease {ECO:0000313|EMBL:AHM02051.1}; TaxID=1368239 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured misc
major facilitator superfamily protein
13_1_40cm_4_scaffold_372_3
unknown

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comp(2143..2838)
DNA (696bp) protein (232aa)

This feature has no annotations

13_1_40cm_4_scaffold_372_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3475..4161)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=3 Tax=Burkholderia RepID=B1FSZ0_9BURK id=53324 bin=ACD41 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84733.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_4_scaffold_372_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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4295..6643
DNA (2349bp) protein (783aa)
Subtilisin-like serine protease n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QCK6_9FIRM
peptidase S8/S53 subtilisin kexin sedolisin Tax=RBG_16_RIF_CHLX_72_14_curated
peptidase S8/S53 subtilisin kexin sedolisin
13_1_40cm_4_scaffold_372_6
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7018..7434)
DNA (417bp) protein (139aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E729_METEZ
13_1_40cm_4_scaffold_372_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(7593..8231)
DNA (639bp) protein (213aa)
Beta-lactamase-like id=2157798 bin=GWD2_Nitrospirae-related_57_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
beta-lactamase domain-containing protein Tax=GWC2_Nitrospirae_57_13_curated
beta-lactamase domain protein
13_1_40cm_4_scaffold_372_8
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8544..10025
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003702B8D
Putative Peptidase S8 and S53 {ECO:0000313|EMBL:CCH77666.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
physarolisin II
13_1_40cm_4_scaffold_372_9
unknown

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comp(10070..10549)
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_40cm_4_scaffold_372_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(10503..13370)
DNA (2868bp) protein (956aa)
putative ATP-dependent helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_16_Archaea_50_20_curated
Putative ATP-dependent helicase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUS9_METPS
putative ATP-dependent helicase
13_1_40cm_4_scaffold_372_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(13442..13852)
DNA (411bp) protein (137aa)
Glycine cleavage system H protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMF3_9FIRM
gcsH4; glycine cleavage system protein H; K02437 glycine cleavage system H protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_372_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13990..14550)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D595_9ARCH
NT5C domain containing protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_372_13
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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14633..15241
DNA (609bp) protein (203aa)
Nitroreductase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKQ6_9ARCH
Nitroreductase {ECO:0000313|EMBL:EGG42065.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limni
nitroreductase
13_1_40cm_4_scaffold_372_14
unknown

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15790..15999
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_4_scaffold_372_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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16366..16911
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z8H2_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_4_scaffold_372_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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16911..17885
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RZ05_THEPD
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_4_scaffold_372_17
RBG_16_Archaea_50_20_curated, Archaea

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18029..18607
DNA (579bp) protein (193aa)
RNA-binding protein, containing S1 domain n=2 Tax=Methanosarcina mazei RepID=M1QJY3_METMZ
RNA binding protein; K07573 exosome complex component CSL4 Tax=RBG_16_Archaea_50_20_curated
RNA-binding protein, containing S1 domain
13_1_40cm_4_scaffold_372_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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18604..18897
DNA (294bp) protein (98aa)
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5241762 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_372_19
Prevotella sp. oral taxon 299, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18915..19592
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Prevotella nanceiensis RepID=UPI00036099CA
HAD hydrolase, family IA
HAD hydrolase, family IA {ECO:0000313|EMBL:EFC71051.1}; TaxID=575614 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 299 s
13_1_40cm_4_scaffold_372_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

19640..20008
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A5J1_THEGJ
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_372_21
unknown

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20005..20499
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_4_scaffold_372_22
RBG_16_Archaea_50_20_curated, Archaea

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20535..20858
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPL5_THELI
DNA-directed RNA polymerase subunit M Tax=RBG_16_Archaea_50_20_curated
DNA-directed RNA polymerase subunit M
13_1_40cm_4_scaffold_372_23
RBG_16_Archaea_50_20_curated, Archaea

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20861..21673
DNA (813bp) protein (271aa)
DNA polymerase sliding clamp n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MUU8_PYRCJ
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen Tax=RBG_16_Archaea_50_20_curated
monomeric archaeal DNA polymerase sliding clamp
13_1_40cm_4_scaffold_372_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21600..22880)
DNA (1281bp) protein (427aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_4_scaffold_372_25
RBG_16_Archaea_50_20_curated, Archaea

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23007..24059
DNA (1053bp) protein (351aa)
priB; DNA primase, large subunit; K02685 DNA primase large subunit [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
DNA primase large subunit PriL n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I855_METCZ
priB; DNA primase, large subunit
13_1_40cm_4_scaffold_372_26
RBG_16_Archaea_50_20_curated, Archaea

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24046..25260
DNA (1215bp) protein (405aa)
putative DNA primase, small subunit; K02683 DNA primase [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
DNA primase small subunit (EC:2.7.7.-)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI0003630E41
13_1_40cm_4_scaffold_372_27
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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25441..25890
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E549_9ARCH
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_4_scaffold_372_28
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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25883..26215
DNA (333bp) protein (111aa)
50S ribosomal protein L44e n=1 Tax=uncultured archaeon RepID=G3C9C5_9ARCH
50S ribosomal protein L44e Tax=RBG_16_Bathyarchaeota_48_13_curated
50S ribosomal protein L44
13_1_40cm_4_scaffold_372_29
RBG_16_Archaea_50_20_curated, Archaea

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26220..26411
DNA (192bp) protein (64aa)
30S ribosomal protein S27e n=1 Tax=Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) RepID=G4RNU7_THETK
rps27e; 30S ribosomal protein S27e; K02978 small subunit ribosomal protein S27e Tax=RBG_16_Archaea_50_20_curated
rps27e; 30S ribosomal protein S27e
13_1_40cm_4_scaffold_372_30
RBG_16_Archaea_50_20_curated, Archaea

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26434..27225
DNA (792bp) protein (264aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=IF2A_METKA
translation initiation factor 2, subunit alpha; K03237 translation initiation factor 2 subunit 1 Tax=RBG_16_Archaea_50_20_curated
SUI2; translation initiation factor IF-2 subunit alpha
Displaying items 1-30 of 35 in total

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