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13_1_40cm_4_scaffold_373

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_373_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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2..472
DNA (471bp) protein (157aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Inner-membrane translocator id=4973971 bin=GWA2_Methylomirabilis_73_35 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
13_1_40cm_4_scaffold_373_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

473..988
DNA (516bp) protein (172aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related id=4973972 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
13_1_40cm_4_scaffold_373_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

985..1230
DNA (246bp) protein (82aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter related id=4973972 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
13_1_40cm_4_scaffold_373_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1223..1924
DNA (702bp) protein (234aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter related protein id=4973973 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_40cm_4_scaffold_373_5
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

1949..2869
DNA (921bp) protein (307aa)
Methyltransferase, FkbM family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCL5_SINAD
FkbM family methyltransferase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
FkbM family methyltransferase
13_1_40cm_4_scaffold_373_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2866..4491)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ76_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60114.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
13_1_40cm_4_scaffold_373_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4573..6225)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ76_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60114.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
13_1_40cm_4_scaffold_373_8
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(6222..6920)
DNA (699bp) protein (233aa)
putative glycosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AB-629-G21 RepID=UPI0003752CE9
family 2 glycosyltransferase
13_1_40cm_4_scaffold_373_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6920..7738)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DVF5_9BACT
methyltransferase-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
methyltransferase-like protein
13_1_40cm_4_scaffold_373_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7735..8826)
DNA (1092bp) protein (364aa)
arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB (EC:2.6.1.-); K13010 perosamine synthetase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB (EC:2.6.1.-)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZJ76_ROSLO
13_1_40cm_4_scaffold_373_11
unknown

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comp(8823..9032)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_4_scaffold_373_12
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9029..10507)
DNA (1479bp) protein (493aa)
glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
Glycosyl transferase family 2 id=2907808 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
glycosyl transferase family protein
13_1_40cm_4_scaffold_373_13
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10516..11754)
DNA (1239bp) protein (413aa)
NDP-hexose 3-C-methyltransferase TylCIII id=2520603 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
NDP-hexose 3-C-methyltransferase TylCIII Tax=RBG_16_Deltaproteobacteria_58_17_curated
putative S-adenosyl-dependent methyltransferase
13_1_40cm_4_scaffold_373_14
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

11982..13628
DNA (1647bp) protein (549aa)
Glycosyl transferase, family 39 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPL0_9BACT
hypothetical protein Tax=RBG_13_OP3X_46_9_curated
hypothetical protein
13_1_40cm_4_scaffold_373_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13625..14080
DNA (456bp) protein (152aa)
MaoC domain-containing protein dehydratase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4973974 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_373_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14181..14684
DNA (504bp) protein (168aa)
MOSC domain containing protein id=4973976 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MOSC domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
MOSC domain-containing protein
13_1_40cm_4_scaffold_373_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14681..15859
DNA (1179bp) protein (393aa)
glycine/D-amino acid oxidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FAD dependent oxidoreductase id=4973977 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid dehydrogenase
13_1_40cm_4_scaffold_373_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15903..16919)
DNA (1017bp) protein (339aa)
TRAP transporter solute receptor, TAXI family; K07080 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TRAP transporter solute receptor, TAXI family id=4973980 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_373_19
unknown

Not on your lists

comp(16933..17472)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_4_scaffold_373_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17634..19148
DNA (1515bp) protein (505aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=3775393 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_373_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19145..20011
DNA (867bp) protein (289aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] id=14625563 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
Displaying 21 items

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