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13_1_40cm_4_scaffold_38344

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_38344_1
unknown

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comp(1..288)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_4_scaffold_38344_2
unknown

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comp(300..545)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_38344_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1585..3201
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCF9_9BACT
hypothetical protein; K07052 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_38344_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4933..5505
DNA (573bp) protein (191aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=GWA2_Rokubacteria_73_35_curated
DNA ligase D id=4930074 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA ligase D
13_1_40cm_4_scaffold_38344_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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5502..6098
DNA (597bp) protein (199aa)
GCN5-related N-acetyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF6_RUBXD
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABG04622.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sourc
13_1_40cm_4_scaffold_38344_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6095..6616)
DNA (522bp) protein (174aa)
Phosphinothricin acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] Tax=GWA2_Rokubacteria_73_35_curated
Sortase-like acyltransferase id=4930076 bin=GWA2_Methylomirabilis_73_35 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-acetyltransferase
13_1_40cm_4_scaffold_38344_7
unknown

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comp(6606..6812)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_38344_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6892..7788
DNA (897bp) protein (299aa)
LysR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, LysR family id=4930078 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LysR family transcriptional regulator
13_1_40cm_4_scaffold_38344_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7759..7899)
DNA (141bp) protein (47aa)
Putative uncharacterized protein id=4930082 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Displaying 9 items

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