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13_1_40cm_4_scaffold_395

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_395_1
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(1..1071)
DNA (1071bp) protein (357aa)
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein id=14631017 bin=bin9_gal15 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_4_scaffold_395_trna_1
unknown

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comp(1467..1581)
DNA (115bp)
transferRNA
13_1_40cm_4_scaffold_395_2
unknown

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comp(2601..2876)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_395_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

3066..4283
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003700D8A
lrpC; AsnC family transcriptional regulator
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_395_4
RBG_16_Archaea_50_20_curated, Archaea

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5253..7172
DNA (1920bp) protein (640aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] Tax=RBG_16_Archaea_50_20_curated
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6UWF6_9EURY
13_1_40cm_4_scaffold_395_5
RBG_16_Archaea_50_20_curated, Archaea

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comp(7177..8106)
DNA (930bp) protein (310aa)
aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RBG_16_Archaea_50_20_curated
aspartate carbamoyltransferase n=1 Tax=Thermococcus zilligii RepID=UPI00029A3195
aspartate carbamoyltransferase catalytic subunit
13_1_40cm_4_scaffold_395_6
unknown

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8160..8531
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_4_scaffold_395_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8528..8986
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDS2_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU59536.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_40cm_4_scaffold_395_8
unknown

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comp(8993..9334)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_395_9
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(9547..11004)
DNA (1458bp) protein (486aa)
DNA polymerase II small subunit; K02323 DNA polymerase II small subunit [EC:2.7.7.7] Tax=RBG_16_Bathyarchaeota_48_13_curated
polB1; DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGL6_NITGG
13_1_40cm_4_scaffold_395_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(11126..12007)
DNA (882bp) protein (294aa)
Phosphate uptake regulator, PhoU n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVU5_9ARCH
putative phosphate transport system protein Tax=RBG_16_Archaea_50_20_curated
phosphate uptake regulator
13_1_40cm_4_scaffold_395_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12154..13287)
DNA (1134bp) protein (378aa)
GTPase HflX n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKP3_THELI
GTP-binding proten HflX; K03665 GTP-binding protein HflX Tax=RBG_13_Bathyarchaeota_38_9_curated
GTP-binding protein HflX
13_1_40cm_4_scaffold_395_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13357..13677)
DNA (321bp) protein (107aa)
Vacuolar H+transporting two-sector ATPase F subunit; K02122 V-type H+-transporting ATPase subunit F [EC:3.6.3.14] Tax=RBG_16_Archaea_50_20_curated
V-type ATP synthase subunit F n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RDT3_METVM
V-type ATP synthase subunit F
13_1_40cm_4_scaffold_395_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(13687..14373)
DNA (687bp) protein (229aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] id=5040692 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
thermostable 8-oxoguanine DNA glycosylase Tax=AR5
13_1_40cm_4_scaffold_395_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(14354..14830)
DNA (477bp) protein (159aa)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I483_METCZ
aspartate carbamoyltransferase, regulatory subunit; K00610 aspartate carbamoyltransferase regulatory subunit Tax=RBG_16_Archaea_50_20_curated
pyrI; aspartate carbamoyltransferase, regulatory subunit
13_1_40cm_4_scaffold_395_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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14890..15309
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBZ9_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_4_scaffold_395_16
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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15714..16868
DNA (1155bp) protein (385aa)
ORC1-type DNA replication protein n=2 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=CDC6_PYRHO
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 Tax=RBG_16_Bathyarchaeota_48_13_curated
cdc6; cell division control protein 6
13_1_40cm_4_scaffold_395_17
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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16831..17427
DNA (597bp) protein (199aa)
UPF0215 protein B655_2062 n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U8G4_9EURY
hypothetical protein; K09120 hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_4_scaffold_395_18
unknown

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17471..17704
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_4_scaffold_395_19
unknown

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17709..17936
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_4_scaffold_395_20
unknown

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comp(18027..19145)
DNA (1119bp) protein (373aa)

This feature has no annotations

13_1_40cm_4_scaffold_395_21
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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19300..19821
DNA (522bp) protein (174aa)
Tax=RBG_16_Bathyarchaeota_48_13_curated
13_1_40cm_4_scaffold_395_22
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

20024..20755
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILM6_NITGG
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_4_scaffold_395_23
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(20712..21122)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7L6_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ48285.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_40cm_4_scaffold_395_24
unknown

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comp(21315..24026)
DNA (2712bp) protein (904aa)

This feature has no annotations

13_1_40cm_4_scaffold_395_25

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24048..24689
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035E799E
M50 family metallopeptidase
Peptidase M50 {ECO:0000313|EMBL:AJF60715.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
13_1_40cm_4_scaffold_395_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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24846..25733
DNA (888bp) protein (296aa)
Phosphate transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ33_PSEUX
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:AEA23525.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (stra
13_1_40cm_4_scaffold_395_27
unknown

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comp(25780..26634)
DNA (855bp) protein (285aa)

This feature has no annotations

13_1_40cm_4_scaffold_395_28
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

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26794..27180
DNA (387bp) protein (129aa)
Transcriptional repressor, CopY family n=1 Tax=Thermincola potens (strain JR) RepID=D5X9D4_THEPJ
transcriptional repressor, CopY family; K07737 putative transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
CopY family transcriptional repressor
13_1_40cm_4_scaffold_395_29
RBG_16_Archaea_50_20_curated, Archaea

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27471..28088
DNA (618bp) protein (206aa)
Glr2028 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NJ04_GLOVI
peptidase M56 BlaR1 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
Displaying items 1-30 of 33 in total

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