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13_1_40cm_4_scaffold_4154

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4154_1
unknown

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1..78
DNA (78bp) protein (26aa)

This feature has no annotations

13_1_40cm_4_scaffold_4154_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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122..1999
DNA (1878bp) protein (626aa)
PAS domain S-box n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH59_SINAD
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AGA28190.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila
13_1_40cm_4_scaffold_4154_3
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

2166..2348
DNA (183bp) protein (61aa)
copper-transporting P-type ATPase (EC:3.6.3.4)
heavy metal efflux P-type ATPase Tax=RBG_16_Nitrospirae_43_8_curated
13_1_40cm_4_scaffold_4154_4
R_OD1_56_18, Parcubacteria, Bacteria

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2670..4238
DNA (1569bp) protein (523aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VR96_POLNA
PAS domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_4154_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4243..5025
DNA (783bp) protein (261aa)
Putative phosphoesterase, ICC n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WD52_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
phosphoesterase, ICC
13_1_40cm_4_scaffold_4154_6
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5022..5930
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FA4B1D
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
hypothetical protein
13_1_40cm_4_scaffold_4154_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6166..6585
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAR2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63097.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_40cm_4_scaffold_4154_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6589..7638)
DNA (1050bp) protein (350aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X7E9_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:ETX06447.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_4_scaffold_4154_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(7635..8417)
DNA (783bp) protein (261aa)
short-chain dehydrogenase/reductase SDR id=14627922 bin=bin7_NC10_sister species=Natronorubrum tibetense genus=Natronorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR Tax=CSP1_6_Rokubacteria
gluconate dehydrogenase
13_1_40cm_4_scaffold_4154_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8419..8739)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003642595
NIPSNAP family containing protein {ECO:0000313|EMBL:ETW97806.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp.
NIPSNAP family containing protein
13_1_40cm_4_scaffold_4154_11
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8891..9742
DNA (852bp) protein (284aa)
Xylose isomerase domain-containing protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CSA6_9BURK
Xylose isomerase domain-containing protein {ECO:0000313|EMBL:EIM98774.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source
xylose isomerase domain-containing protein
13_1_40cm_4_scaffold_4154_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9739..10899
DNA (1161bp) protein (387aa)
methionine synthase II (cobalamin-independent)-like protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=GWA2_Rokubacteria_70_23_curated
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FTE3_9GAMM
methionine synthase II (cobalamin-independent)-like protein
13_1_40cm_4_scaffold_4154_13
RLO_RIF02_62_27, RIF2, Bacteria

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10899..11675
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BIV7_MEISD
short-chain dehydrogenase/reductase sdr Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
short-chain dehydrogenase/reductase sdr
13_1_40cm_4_scaffold_4154_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11683..11946)
DNA (264bp) protein (88aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA26290.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA26290.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT72_PSEUX
13_1_40cm_4_scaffold_4154_15
unknown

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12075..12257
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_4_scaffold_4154_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13289..14053
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HEB5_PSEAC
putative hydrolase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative hydrolase
13_1_40cm_4_scaffold_4154_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14067..15338
DNA (1272bp) protein (424aa)
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
CinA-like protein id=4532703 bin=GWF2_Methylomirabilis_70_14 species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
competence/damage-inducible protein cinA
13_1_40cm_4_scaffold_4154_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15380..16369
DNA (990bp) protein (330aa)
zinc-binding dehydrogenase family oxidoreductase; K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9J9_9BURK
zinc-binding dehydrogenase oxidoreductase
13_1_40cm_4_scaffold_4154_19
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16430..17020)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B33A6A
Uncharacterized protein {ECO:0000313|EMBL:CEL16152.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
13_1_40cm_4_scaffold_4154_20
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17224..17754
DNA (531bp) protein (177aa)
TPR repeat n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BT9_POLSJ
hypothetical protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
13_1_40cm_4_scaffold_4154_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17776..20151
DNA (2376bp) protein (792aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=GWC2_Rokubacteria_70_16_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037155A5
13_1_40cm_4_scaffold_4154_22
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20120..20401)
DNA (282bp) protein (94aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Putative uncharacterized protein id=1875749 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Displaying 22 items

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