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13_1_40cm_4_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_46_1
unknown

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810..1223
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_4_scaffold_46_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1324..1986
DNA (663bp) protein (221aa)
Putative translation initiation factor eIF-6 n=1 Tax=uncultured Acidilobus sp. MG RepID=V4LV87_9CREN
translation initiation factor 6 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor 6
13_1_40cm_4_scaffold_46_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2241..2711
DNA (471bp) protein (157aa)
Prefoldin subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDA_METKA
GIM5; prefoldin subunit alpha; K04797 prefoldin alpha subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
GIM5; prefoldin subunit alpha
13_1_40cm_4_scaffold_46_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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3086..3991
DNA (906bp) protein (302aa)
Signal recognition particle receptor FtsY n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YUP3_THEON
FtsY-like signal recognition particle receptor protein subunit alpha; K03110 fused signal recognition particle receptor Tax=RBG_13_Bathyarchaeota_38_9_curated
signal recognition particle GTPase
13_1_40cm_4_scaffold_46_5
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(4056..4265)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4I4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47203.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_40cm_4_scaffold_46_6
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4465..5388
DNA (924bp) protein (308aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=370438 species="Bacte
Ornithine carbamoyltransferase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D509_PELTS
ArgF; ornithine carbamoyltransferase
13_1_40cm_4_scaffold_46_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5557..5769
DNA (213bp) protein (71aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_4_scaffold_46_8
RBG_16_Archaea_50_20_curated, Archaea

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5780..6277
DNA (498bp) protein (166aa)
Transcription elongation factor Spt5 n=2 Tax=Pyrococcus furiosus RepID=SPT5_PYRFU
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Archaea_50_20_curated
nusG; transcription antitermination protein NusG
13_1_40cm_4_scaffold_46_9
RBG_16_Archaea_50_20_curated, Archaea

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6339..6746
DNA (408bp) protein (136aa)
50S ribosomal protein L11 n=1 Tax=Thermofilum sp. 1910b RepID=S5ZCQ7_9CREN
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L11
13_1_40cm_4_scaffold_46_10
RBG_16_Archaea_50_20_curated, Archaea

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6759..7421
DNA (663bp) protein (221aa)
50S ribosomal protein L1 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB5_METFV
50S ribosomal protein L1 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L1
13_1_40cm_4_scaffold_46_11
RBG_16_Archaea_50_20_curated, Archaea

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7426..8301
DNA (876bp) protein (292aa)
50S ribosomal protein L10 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEN6_PYRF1
rpl10p; acidic ribosomal protein P0 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L10
13_1_40cm_4_scaffold_46_12
RBG_16_Archaea_50_20_curated, Archaea

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8362..8664
DNA (303bp) protein (101aa)
50S ribosomal protein L12 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MP7_NANEQ
rpl12p; 50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=RBG_16_Archaea_50_20_curated
rpl12p; 50S ribosomal protein L12P
13_1_40cm_4_scaffold_46_13
RBG_16_Archaea_50_20_curated, Archaea

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8778..11570
DNA (2793bp) protein (931aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Archaea_50_20_curated
Alanine--tRNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKE3_THELI
alanyl-tRNA synthetase
13_1_40cm_4_scaffold_46_14
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11755..14478
DNA (2724bp) protein (908aa)
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=926571 species="Archaea; Thaumarc
Leucine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH1_NITGG
13_1_40cm_4_scaffold_46_15
unknown

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comp(14485..14775)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_46_16
unknown

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comp(15116..15316)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_46_17
RBG_16_Archaea_50_20_curated, Archaea

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15413..16570
DNA (1158bp) protein (386aa)
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_16_Archaea_50_20_curated
ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKR1_HYPBU
13_1_40cm_4_scaffold_46_18
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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16624..17766
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30161_ARCFU
hypothetical protein
Single-stranded DNA-specific exonuclease {ECO:0000313|EMBL:AIG96915.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeo
13_1_40cm_4_scaffold_46_19
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(17763..19343)
DNA (1581bp) protein (527aa)
1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:BAJ49356.1}; EC=1.5.1.12 {ECO:0000313|EMBL:BAJ49356.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatu
1-pyrroline-5-carboxylate dehydrogenase n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5R4_9ARCH
13_1_40cm_4_scaffold_46_20
unknown

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19476..19733
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_4_scaffold_46_21
RBG_16_Archaea_50_20_curated, Archaea

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comp(20263..20877)
DNA (615bp) protein (205aa)
Phosphoribosyltransferase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZW7_FERPA
Orotate phosphoribosyltransferase protein Tax=RBG_16_Archaea_50_20_curated
phosphoribosyltransferase
13_1_40cm_4_scaffold_46_22
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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21008..22234
DNA (1227bp) protein (409aa)
Nicotinate phosphoribosyltransferase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AG18_PYRYC
nicotinate phosphoribosyltransferase
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:AEH25072.1}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanos
13_1_40cm_4_scaffold_46_23
unknown

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22408..22860
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_4_scaffold_46_24
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22982..23920
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0L9W4_9EURY
Threonine dehydratase {ECO:0000313|EMBL:KGN02803.1}; TaxID=1444290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4570.;"
threonine dehydratase
13_1_40cm_4_scaffold_46_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(23931..24938)
DNA (1008bp) protein (336aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V5B1_THELD
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
13_1_40cm_4_scaffold_46_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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25167..26135
DNA (969bp) protein (323aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_4_scaffold_46_27
RBG_16_Archaea_50_20_curated, Archaea

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26308..27141
DNA (834bp) protein (278aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_46_28
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(27147..28685)
DNA (1539bp) protein (513aa)
DNA topoisomerase I {ECO:0000313|EMBL:BAJ49459.1}; EC=5.99.1.2 {ECO:0000313|EMBL:BAJ49459.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" s
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NAV3_9ARCH
13_1_40cm_4_scaffold_46_29
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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28861..29487
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RIX4_HALHG
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_4_scaffold_46_30
Thermococcus eurythermalis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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29593..31071
DNA (1479bp) protein (493aa)
DEAD/DEAH box helicase n=1 Tax=Thermococcus zilligii RepID=UPI00029B5638
DEAD/DEAH box helicase
Thermococcus eurythermalis strain A501, complete genome {ECO:0000313|EMBL:AIU70716.1}; TaxID=1505907 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" sour
Displaying items 1-30 of 68 in total

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