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13_1_40cm_4_scaffold_5011

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5011_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..1099)
DNA (1098bp) protein (366aa)
Copper resistance D domain protein id=4931800 bin=GWC2_Methylomirabilis_70_16 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
copper resistance D domain-containing protein; K07245 putative copper resistance protein D Tax=GWC2_Rokubacteria_70_16_curated
copper resistance protein CopC
13_1_40cm_4_scaffold_5011_2
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1265..3262
DNA (1998bp) protein (666aa)
Prolin-rich exported protein id=4224088 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative prolin-rich exported protein Tax=GWA2_Rhodocyclales_65_20_curated
prolin-rich exported protein
13_1_40cm_4_scaffold_5011_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3312..3674)
DNA (363bp) protein (121aa)
Alkylhydroperoxidase {ECO:0000313|EMBL:ETW98688.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Uncharacterized protein id=4695049 bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alkylhydroperoxidase
13_1_40cm_4_scaffold_5011_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3845..5410
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAG2_NITMU
Membrane protein {ECO:0000313|EMBL:KIO50098.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
13_1_40cm_4_scaffold_5011_5
unknown

Not on your lists

comp(5534..5995)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_4_scaffold_5011_6
unknown

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comp(6055..6528)
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_4_scaffold_5011_7
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6533..8488)
DNA (1956bp) protein (652aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ id=4374705 bin=GWF2_Methylomirabilis_70_14 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KIG17309.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
13_1_40cm_4_scaffold_5011_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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8533..9450
DNA (918bp) protein (306aa)
TRAP dicarboxylate family transporter subunit DctP Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Putative C4-dicarboxylate transport system C4-dicarboxylate-binding protein id=4793471 bin=GWA2_Methylomirabilis_73_35 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP dicarboxylate family transporter subunit DctP
13_1_40cm_4_scaffold_5011_9
unknown

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comp(9490..9636)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_4_scaffold_5011_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10611..10739
DNA (129bp) protein (43aa)
acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha Tax=GWC2_Rokubacteria_70_16_curated
Pyruvate dehydrogenase (Acetyl-transferring) id=4012725 bin=GWF2_Methylomirabilis_70_14 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5011_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10747..11571
DNA (825bp) protein (275aa)
pyruvate dehydrogenase E1 component alpha subunit; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=GWA2_Rokubacteria_70_23_curated
Pyruvate dehydrogenase (Acetyl-transferring) id=4012725 bin=GWF2_Methylomirabilis_70_14 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyruvate dehydrogenase E1 component alpha subunit
13_1_40cm_4_scaffold_5011_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11599..12534
DNA (936bp) protein (312aa)
Putative alpha/beta hydrolase fold n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8K3_9ZZZZ
alpha/beta hydrolase Tax=RBG_16_Gamma2_60_9_curated
alpha/beta hydrolase
13_1_40cm_4_scaffold_5011_13

Not on your lists

12568..13449
DNA (882bp) protein (294aa)
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (EC:1.14.11.-)
Alpha-KG-dehydrogenase (Fragment) n=1 Tax=uncultured bacterium RepID=C7C219_9BACT
Alpha-ketoglutarate dioxygenase-like protein {ECO:0000313|EMBL:CBJ18759.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_5011_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

13520..15313
DNA (1794bp) protein (598aa)
ABC transporter ATPase (EC:3.6.3.-)
ABC-type transport system, ATPase component {ECO:0000313|EMBL:CBK43687.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBK43687.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitros
ABC-type transport system, ATPase component id=3959918 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5011_15
Sporothrix schenckii, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

15635..16627
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) RepID=U7PS25_SPOS1
Uncharacterized protein {ECO:0000313|EMBL:ERS98377.1}; TaxID=1391915 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomatace
psrP; Large surface exposed glycoprotein PsrP
13_1_40cm_4_scaffold_5011_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16801..18411)
DNA (1611bp) protein (537aa)
Drug resistance transporter, EmrB/QacA subfamily id=4748857 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B Tax=GWC2_Rokubacteria_70_16_curated
DSBA oxidoreductase
13_1_40cm_4_scaffold_5011_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18606..19406
DNA (801bp) protein (267aa)
Beta-lactamase like protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CHF0_9BURK
beta-lactamase domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
beta-lactamase
13_1_40cm_4_scaffold_5011_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19501..20550
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000361F0ED
Uncharacterized protein {ECO:0000313|EMBL:ETW95758.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase-like monooxygenase
13_1_40cm_4_scaffold_5011_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20577..21266
DNA (690bp) protein (230aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4793461 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_5011_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21439..21948
DNA (510bp) protein (170aa)
Putative uncharacterized protein id=3716782 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_5011_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21953..22549
DNA (597bp) protein (199aa)
Putative uncharacterized protein id=4219817 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_5011_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22609..23148
DNA (540bp) protein (180aa)
pyruvate dehydrogenase E1 component beta subunit; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=GWA2_Rokubacteria_73_35_curated
Transketolase central region id=3716780 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyruvate dehydrogenase E1 component beta subunit
Displaying 22 items

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