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13_1_40cm_4_scaffold_5019

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5019_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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25..1425
DNA (1401bp) protein (467aa)
Hypothetical membrane protein id=4504315 bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40669.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
13_1_40cm_4_scaffold_5019_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1431..2879
DNA (1449bp) protein (483aa)
Putative outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADU1_GEMAT
putative outer membrane efflux protein
Putative outer membrane efflux protein {ECO:0000313|EMBL:BAH40668.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurant
13_1_40cm_4_scaffold_5019_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2883..4454)
DNA (1572bp) protein (524aa)
Putative S1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB13_GEMAT
putative S1 family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
PDZ/DHR/GLGF domain protein
13_1_40cm_4_scaffold_5019_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4479..6404)
DNA (1926bp) protein (642aa)
Chaperone protein DnaK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB12_GEMAT
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RBG_16_Gemmatimonadetes_66_8_curated
Chaperone protein dnaK
13_1_40cm_4_scaffold_5019_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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6517..6882
DNA (366bp) protein (122aa)
Rhomboid family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAN7_ANADF
rhomboid family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
rhomboid family protein
13_1_40cm_4_scaffold_5019_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6834..7232
DNA (399bp) protein (133aa)
rhomboid family protein id=12557265 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rhomboid family protein
13_1_40cm_4_scaffold_5019_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7210..7890)
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB06_GEMAT
phoU; phosphate transport system regulatory protein PhoU; K02039 phosphate transport system protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phoU; phosphate transport system regulatory protein PhoU
13_1_40cm_4_scaffold_5019_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7887..8273)
DNA (387bp) protein (129aa)
phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=GWC2_Gemmatimonadetes_71_10_curated
Phosphate transport system permease protein 1 n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRR3_9RHOB
phosphate ABC transporter ATPase
13_1_40cm_4_scaffold_5019_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8689..9393)
DNA (705bp) protein (235aa)
phosphate ABC transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphate import ATP-binding protein PstB n=2 Tax=Geobacter metallireducens RepID=PSTB_GEOMG
pstB; phosphate ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_5019_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9354..10187)
DNA (834bp) protein (278aa)
Phosphate transport system permease protein PstA n=1 Tax=uncultured bacterium F25-01 RepID=I3VIG0_9BACT
phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphate ABC transporter permease
13_1_40cm_4_scaffold_5019_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10226..11227)
DNA (1002bp) protein (334aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMC5_KORVE
phosphate ABC transporter permease; K02037 phosphate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphate ABC transporter permease
13_1_40cm_4_scaffold_5019_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11252..12307)
DNA (1056bp) protein (352aa)
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphate ABC transporter, periplasmic phosphate-binding protein id=3880880 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter periplasmic phosphate binding protein
13_1_40cm_4_scaffold_5019_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12327..13376)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037A3B35
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_5019_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14056..14628
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ54_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_5019_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14579..15334)
DNA (756bp) protein (252aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
phoB; phosphate regulon transcriptional regulatory protein PhoB
13_1_40cm_4_scaffold_5019_16
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15334..15759)
DNA (426bp) protein (142aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FMR0_9CLOT
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EMS73515.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clo
hypothetical protein
13_1_40cm_4_scaffold_5019_17
R_OD1_Wolfebacteria_44_18, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(15759..16592)
DNA (834bp) protein (278aa)
GA24970 gene product from transcript GA24970-RA; K01137 N-acetylglucosamine-6-sulfatase [EC:3.1.6.14]
Alkaline phosphodiesterase I n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V7W5_9BACT
type I phosphodiesterase/nucleotide pyrophosphatase Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_44_18_curated
13_1_40cm_4_scaffold_5019_18
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16580..17656)
DNA (1077bp) protein (359aa)
Glycosyltransferase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L1N1_FRAAD
Glycosyl transferase family 1 {ECO:0000313|EMBL:KJS47341.1}; Flags: Fragment;; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacteriu
glycosyltransferase
13_1_40cm_4_scaffold_5019_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17749..19473)
DNA (1725bp) protein (575aa)
phoR; phosphate regulon sensor protein PhoR; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curat
Phosphate regulon sensor protein PhoR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ6_GEMAT
phoR; phosphate regulon sensor protein PhoR
13_1_40cm_4_scaffold_5019_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19470..20237)
DNA (768bp) protein (256aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
phoB; phosphate regulon transcriptional regulatory protein PhoB
13_1_40cm_4_scaffold_5019_21
unknown

Not on your lists

20323..20517
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 21 items

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