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13_1_40cm_4_scaffold_5262

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5262_1
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..319)
DNA (318bp) protein (106aa)
Tyrosine recombinase XerD n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67ND7_SYMTH
xerD; site-specific tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
recombinase
13_1_40cm_4_scaffold_5262_2
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(316..1173)
DNA (858bp) protein (286aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=2 Tax=Caldanaerobacter subterraneus RepID=LIPA_THETN
LipA2; lipoyl synthase
13_1_40cm_4_scaffold_5262_3

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comp(1243..1746)
DNA (504bp) protein (168aa)
Transcriptional regulator, CarD family n=1 Tax=sediment metagenome RepID=D9PL55_9ZZZZ
Transcriptional regulator, CarD family {ECO:0000313|EMBL:EFK95711.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
CarD family transcriptional regulator
13_1_40cm_4_scaffold_5262_4
unknown

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comp(1893..2693)
DNA (801bp) protein (267aa)

This feature has no annotations

13_1_40cm_4_scaffold_5262_5
unknown

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3001..4038
DNA (1038bp) protein (346aa)

This feature has no annotations

13_1_40cm_4_scaffold_5262_6
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(4014..5315)
DNA (1302bp) protein (434aa)
pyrimidine-nucleoside phosphorylase id=7201184 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
pyrimidine-nucleoside phosphorylase Tax=RIFOXYC12_FULL_TA06_54_24_curated
pyrimidine-nucleoside phosphorylase
13_1_40cm_4_scaffold_5262_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5339..6010
DNA (672bp) protein (224aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035D31F1
exsB; exoenzyme S synthesis protein B
13_1_40cm_4_scaffold_5262_8
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6115..6612
DNA (498bp) protein (166aa)
radical SAM domain protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AF5D
putative radical-activating enzyme, radical SAM superfamily
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_1_40cm_4_scaffold_5262_9
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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6609..7001
DNA (393bp) protein (131aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:BAI81386.1}; EC=5.1.99.1 {ECO:0000313|EMBL:BAI81386.1};; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferriba
Methylmalonyl-CoA epimerase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3P9J6_DEFDS
13_1_40cm_4_scaffold_5262_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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7030..7440
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG41_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_4_scaffold_5262_11
unknown

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comp(7400..8485)
DNA (1086bp) protein (362aa)

This feature has no annotations

13_1_40cm_4_scaffold_5262_12

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comp(8436..9050)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KJE5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KKO12299.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_5262_13
unknown

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9100..9444
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_4_scaffold_5262_14
unknown

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9441..9629
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_5262_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9629..10390
DNA (762bp) protein (254aa)
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Prephenate dehydrogenase n=2 Tax=Lactococcus lactis subsp. cremoris RepID=TYRA_LACLM
prephenate dehydrogenase
13_1_40cm_4_scaffold_5262_16
R_OP11_Levybacteria_39_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

11786..12697
DNA (912bp) protein (304aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Levybacteria_39_10_curated
Bacterial membrane protein YfhO
13_1_40cm_4_scaffold_5262_17
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12718..14175)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LU67_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY17431.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;"
13_1_40cm_4_scaffold_5262_18
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

14202..15806
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9809 RepID=I4HQC1_MICAE
hypothetical protein Tax=RBG_16_Chloroflexi_52_11_curated
hypothetical protein
13_1_40cm_4_scaffold_5262_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(15914..16654)
DNA (741bp) protein (247aa)
ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYM0_9FIRM
13_1_40cm_4_scaffold_5262_20
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(16696..17922)
DNA (1227bp) protein (409aa)
glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
ank:AnaeK_0107 glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] id=18581 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
glgC; glucose-1-phosphate adenylyltransferase
13_1_40cm_4_scaffold_5262_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18076..18474
DNA (399bp) protein (133aa)
Chaperone protein DnaJ n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HS33_9PROT
chaperone protein; K05516 curved DNA-binding protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
chaperone protein DnaJ
Displaying 21 items

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