ggKbase home page

13_1_40cm_4_scaffold_532

Search features with annotation key words

Displaying items 1-30 of 51 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_532_1
unknown

Not on your lists

1..522
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_4_scaffold_532_2
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

574..1350
DNA (777bp) protein (259aa)
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_4_scaffold_532_3
unknown

Not on your lists

1503..1928
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_4_scaffold_532_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

1977..2420
DNA (444bp) protein (148aa)
Nudix 7..137 id=1247471 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Nudix 7..137 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_1_40cm_4_scaffold_532_5
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2446..3381)
DNA (936bp) protein (312aa)
DNA-3-methyladenine glycosylase II n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL35_METAC
alkA; DNA-3-methyladenine glycosylase II
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:AAM06578.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methan
13_1_40cm_4_scaffold_532_6
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

3509..4267
DNA (759bp) protein (253aa)
Methyltransferase type 11 domain protein n=1 Tax=mine drainage metagenome RepID=T1ANA4_9ZZZZ
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=RBG_16_Euryarchaeota_62_10_curated
type 11 methyltransferase
13_1_40cm_4_scaffold_532_7

Not on your lists

comp(4484..5473)
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MBT2_CALMQ
Uncharacterized protein {ECO:0000313|EMBL:KKN34161.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
aldo/keto reductase
13_1_40cm_4_scaffold_532_8
unknown

Not on your lists

comp(6813..7340)
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_4_scaffold_532_9

Not on your lists

comp(7952..9553)
DNA (1602bp) protein (534aa)
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] id=1250805 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Uncharacterized protein {ECO:0000313|EMBL:EQB63668.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
13_1_40cm_4_scaffold_532_10
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9550..10038)
DNA (489bp) protein (163aa)
ADP-ribose pyrophosphatase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLU2_ACIS0
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
ADP-ribose pyrophosphatase
13_1_40cm_4_scaffold_532_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10052..10402)
DNA (351bp) protein (117aa)
Nascent polypeptide-associated complex protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T6K7_9EURY
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
alpha-NAC-like protein
13_1_40cm_4_scaffold_532_12
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10449..10934)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEJ9_9ARCH
PUA domain containing protein; K07398 conserved protein with predicted RNA binding PUA domain Tax=RBG_16_Bathyarchaeota_48_13_curated
archaeosine tRNA-ribosyltransferase
13_1_40cm_4_scaffold_532_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

11008..11511
DNA (504bp) protein (168aa)
XRE family transcriptional regulator n=1 Tax=Methanobrevibacter smithii RepID=UPI00037B6B23
transcriptional regulator, xre family; K03627 putative transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription factor ( MBF1 related)
13_1_40cm_4_scaffold_532_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11527..11967)
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ9_KORVE
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AHG92523.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_532_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12018..12689
DNA (672bp) protein (224aa)
ankyrin Tax=RBG_16_Euryarchaeota_68_12_curated
ankyrin
Putative ankyrin id=1732030 bin=GWB2_Chloroflexi_54_36 species=Deinococcus deserti genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
13_1_40cm_4_scaffold_532_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13085..13702)
DNA (618bp) protein (206aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] Tax=RBG_16_Archaea_50_20_curated
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX36_METFV
hypothetical protein
13_1_40cm_4_scaffold_532_17
unknown

Not on your lists

14266..14487
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_532_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

14654..15124
DNA (471bp) protein (157aa)
Transcription factor E n=2 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=TFE_METM5
transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription initiation factor E subunit alpha
13_1_40cm_4_scaffold_532_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

15143..15913
DNA (771bp) protein (257aa)
Putative uncharacterized protein PH0618 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58352_PYRHO
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_4_scaffold_532_20
Pyrobaculum calidifontis, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(15929..17104)
DNA (1176bp) protein (392aa)
Formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:ABO07643.1}; EC=2.8.3.16 {ECO:0000313|EMBL:ABO07643.1};; TaxID=410359 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobac
Formyl-CoA transferase n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MSM6_PYRCJ
13_1_40cm_4_scaffold_532_21
unknown

Not on your lists

17141..17716
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_40cm_4_scaffold_532_22
unknown

Not on your lists

17728..18294
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_40cm_4_scaffold_532_23
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

18354..18644
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXF5_THERP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM04572.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATC
13_1_40cm_4_scaffold_532_24
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

18644..19411
DNA (768bp) protein (256aa)
Biotin/lipoate A/B protein ligase family protein; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_13_Bathyarchaeota_38_9_curated
Lipoate-protein ligase A n=1 Tax=uncultured Acidilobus sp. CIS RepID=V4JWC4_9CREN
Biotin/lipoate A/B protein ligase family protein
13_1_40cm_4_scaffold_532_25
unknown

Not on your lists

19528..19842
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_4_scaffold_532_26
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

20255..21700
DNA (1446bp) protein (482aa)
Multidrug resistance protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LNG9_9EURY
Multidrug resistance protein {ECO:0000313|EMBL:EQB65868.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon
major facilitator superfamily protein
13_1_40cm_4_scaffold_532_27

Not on your lists

21771..22202
DNA (432bp) protein (144aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L1M7_PICTO
Inosine-5-monophosphate dehydrogenase {ECO:0000313|EMBL:AKA49069.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_40cm_4_scaffold_532_28
unknown

Not on your lists

comp(22211..22561)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_532_29
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

22805..23770
DNA (966bp) protein (322aa)
nadA; quinolinate synthase A (EC:2.5.1.72) id=14426445 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
nadA; quinolinate synthase A (EC:2.5.1.72) Tax=CSP1_2_Dadabacteria
quinolinate synthetase (EC:2.5.1.72)
13_1_40cm_4_scaffold_532_30
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

23937..24620
DNA (684bp) protein (228aa)
N-acetyltransferase n=2 Tax=Chloroflexus RepID=A9WHF1_CHLAA
N-acetyltransferase
N-acetyltransferase {ECO:0000313|EMBL:ABY35663.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aur
Displaying items 1-30 of 51 in total

View Taxonomy