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13_1_40cm_4_scaffold_867

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_867_1
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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276..893
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LG48_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16399.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_867_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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898..1608
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LG49_HALWC
protein of unknown function (DUF1814)
Uncharacterized protein {ECO:0000313|EMBL:AIF82303.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_4_scaffold_867_3
Pontibacillus halophilus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2377..3858
DNA (1482bp) protein (494aa)
Isocitrate lyase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L8C8_9BACI
Isocitrate lyase {ECO:0000313|EMBL:KGX92859.1}; TaxID=1385510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus halophilus JSM 076056 = DSM 19796.
isocitrate lyase
13_1_40cm_4_scaffold_867_4
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3861..5474
DNA (1614bp) protein (538aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggia
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Beggiatoa alba B18LD RepID=I3CKA2_9GAMM
13_1_40cm_4_scaffold_867_5
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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6522..7208
DNA (687bp) protein (229aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG32_ROSCS
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ABU56419.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus
13_1_40cm_4_scaffold_867_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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7423..8085
DNA (663bp) protein (221aa)
PHP domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW18_METFV
putative metal-dependent phosphoesterase, PHP family Tax=RBG_16_Micrarchaeota_36_9_curated
php domain-containing protein
13_1_40cm_4_scaffold_867_7
unknown

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comp(8101..8583)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_4_scaffold_867_8
unknown

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9895..10854
DNA (960bp) protein (320aa)

This feature has no annotations

13_1_40cm_4_scaffold_867_9
unknown

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comp(10867..11463)
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_4_scaffold_867_10
unknown

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comp(11474..11956)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_4_scaffold_867_11
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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12026..12577
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TBI0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EMR74193.1}; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
13_1_40cm_4_scaffold_867_12
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12655..13896)
DNA (1242bp) protein (414aa)
Glycosyl transferase family protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CB68_9EURY
Glycosyl transferase family protein {ECO:0000313|EMBL:ELZ19154.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sali
glycosyl transferase family protein
13_1_40cm_4_scaffold_867_13
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(13911..15446)
DNA (1536bp) protein (512aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_4_scaffold_867_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(15503..16231)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B3BC69
cell wall biosynthesis glycosyltransferase Tax=RBG_16_Thaumarchaeota_49_8_curated
cell wall biosynthesis glycosyltransferase
13_1_40cm_4_scaffold_867_15
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(16228..16737)
DNA (510bp) protein (170aa)
Hexapeptide repeat-containing transferase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQM4_ARCVS
hexapeptide repeat-containing transferase
Hexapeptide repeat-containing transferase {ECO:0000313|EMBL:AEA46586.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeo
13_1_40cm_4_scaffold_867_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(16734..17573)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003745435
oxidoreductase domain-containing protein Tax=RBG_16_Thaumarchaeota_49_8_curated
oxidoreductase domain-containing protein
13_1_40cm_4_scaffold_867_17
unknown

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18993..19262
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_867_18
unknown

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19259..20317
DNA (1059bp) protein (353aa)

This feature has no annotations

13_1_40cm_4_scaffold_867_19
unknown

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20317..20964
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_4_scaffold_867_20
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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20961..22463
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EU98_9EURY
type I phosphodiesterase/nucleotide pyrophosphatase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_867_21
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

22633..23580
DNA (948bp) protein (316aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteri
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T386_THEA1
13_1_40cm_4_scaffold_867_22
unknown

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comp(23768..24259)
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_40cm_4_scaffold_867_23
RBG_16_Archaea_50_20_curated, Archaea

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24275..24751
DNA (477bp) protein (159aa)
UPF0218 protein MCGE09_00122 n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2E5_9ARCH
hypothetical protein; K09735 hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_867_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(24777..25583)
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Clostridium ultunense Esp RepID=M1ZA16_9CLOT
extradiol ring-cleavage dioxygenase Tax=RBG_13_Bathyarchaeota_46_16b_curated
extradiol ring-cleavage dioxygenase
13_1_40cm_4_scaffold_867_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(25662..26795)
DNA (1134bp) protein (378aa)
Permease of the major facilitator superfamily n=1 Tax=Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) RepID=G4RQ68_THETK
major facilitator superfamily protein Tax=RBG_16_Archaea_50_20_curated
major facilitator superfamily permease
13_1_40cm_4_scaffold_867_26
Parcubacteria bacterium GW2011_GWF1_40_5, Parcubacteria, Bacteria

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comp(26941..27375)
DNA (435bp) protein (145aa)
PF03479 domain protein n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0CBE0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKR65098.1}; TaxID=1618955 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_5.;"
putative DNA-binding protein with PD1-likeDNA-binding motif
13_1_40cm_4_scaffold_867_27
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(27444..28748)
DNA (1305bp) protein (435aa)
Transcriptional regulator n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUM9_METMA
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
transcriptional regulator
13_1_40cm_4_scaffold_867_28
unknown

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comp(28865..29218)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_4_scaffold_867_29
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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29854..30798
DNA (945bp) protein (315aa)
NADP-dependent oxidoreductase domain containing protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U7A8_DESML
aldo/keto reductase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
aldo/keto reductase
13_1_40cm_4_scaffold_867_30
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

30827..31429
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR31_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
putative protein of unknown function DUF309
Displaying items 1-30 of 40 in total

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