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13_1_40cm_4_scaffold_1185

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1185_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1..918
DNA (918bp) protein (306aa)
nirK; copper-containing nitrite reductase (EC:1.7.2.1)
Copper-containing nitrite reductase {ECO:0000313|EMBL:CBK43917.1}; EC=1.7.2.1 {ECO:0000313|EMBL:CBK43917.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;"
Copper-containing nitrite reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8T5_9BACT
13_1_40cm_4_scaffold_1185_2
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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951..3830
DNA (2880bp) protein (960aa)
Putative Cytochrome c oxidase, fused subunits I, II, and III (Modular protein) {ECO:0000313|EMBL:CCQ90255.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CCQ90255.1};; TaxID=1266370 species="Bacteria; Nitrospinae; N
Putative Cytochrome c oxidase, fused subunits I, II, and III (Modular protein) n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YYC0_9BACT
hypothetical protein
13_1_40cm_4_scaffold_1185_3
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3835..3996
DNA (162bp) protein (54aa)
Tax=GWA2_Gallionellales_59_43_curated
13_1_40cm_4_scaffold_1185_4
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

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4174..4836
DNA (663bp) protein (221aa)
sodA; superoxide dismutase, iron/manganese-containing protein; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=GWC2_Elusimicrobia_65_9_curated
Superoxide dismutase (Fe) id=4900884 bin=GWA2_Elusimicrobia_66_18 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
manganese and iron superoxide dismutase
13_1_40cm_4_scaffold_1185_5
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4968..5561
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HX25_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EES52735.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;
hypothetical protein
13_1_40cm_4_scaffold_1185_6
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5714..5920
DNA (207bp) protein (69aa)
Zinc finger CDGSH-type domain protein n=1 Tax=Burkholderia sp. H160 RepID=B5WAH2_9BURK
Zinc finger CDGSH-type domain protein {ECO:0000313|EMBL:EEA04540.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
zinc finger CDGSH-type domain containing protein
13_1_40cm_4_scaffold_1185_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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6093..7076
DNA (984bp) protein (328aa)
glk; glucokinase (Glucose kinase) (EC:2.7.1.2) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
glk; glucokinase (Glucose kinase) (EC:2.7.1.2)
Glucokinase (Glucose kinase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX7_9BACT
13_1_40cm_4_scaffold_1185_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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7096..7749
DNA (654bp) protein (218aa)
talC; transaldolase, putative fructose-6-phosphate aldolase (EC:2.2.1.2 4.1.2.-); K00616 transaldolase [EC:2.2.1.2] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
talC; transaldolase, putative fructose-6-phosphate aldolase (EC:2.2.1.2 4.1.2.-)
Probable transaldolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAK9_9BACT
13_1_40cm_4_scaffold_1185_9
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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7762..8484
DNA (723bp) protein (241aa)
Oxidoreductase FAD/NAD(P)-binding family protein n=2 Tax=Legionella longbeachae RepID=D1RJ81_LEGLO
Methane monooxygenase component C {ECO:0000313|EMBL:CDZ79459.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella m
oxidoreductase FAD/NAD(P)-binding
13_1_40cm_4_scaffold_1185_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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8559..8984
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI36_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42923.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_1185_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9055..9408
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI37_9BACT
yeaO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42924.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_1185_12
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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9442..10464
DNA (1023bp) protein (341aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales;
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=planctomycete KSU-1 RepID=I3ILN6_9PLAN
glyceraldehyde-3-phosphate dehydrogenase, type I
13_1_40cm_4_scaffold_1185_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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10482..11402
DNA (921bp) protein (307aa)
HhH-GPD family protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EE91_9CHLR
HhH-GPD family protein {ECO:0000313|EMBL:CCF83003.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source=
HhH-GPD family protein
13_1_40cm_4_scaffold_1185_14
unknown

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11365..11484
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_40cm_4_scaffold_1185_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11532..11798
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W373_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93914.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
Protein of unknown function DUF2945
13_1_40cm_4_scaffold_1185_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

11926..12492
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1F4_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38071.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_4_scaffold_1185_17
unknown

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comp(12449..12688)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_4_scaffold_1185_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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12949..14298
DNA (1350bp) protein (450aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pykA; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8W6_9BACT
Displaying 18 items

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