ggKbase home page

13_1_40cm_4_scaffold_2935

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2935_1
unknown

Not on your lists

comp(3..290)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_4_scaffold_2935_2
unknown

Not on your lists

comp(829..1353)
DNA (525bp) protein (175aa)

This feature has no annotations

13_1_40cm_4_scaffold_2935_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1551..3626
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000376EF43
transcriptional regulator domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
transcriptional regulator domain-containing protein
13_1_40cm_4_scaffold_2935_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3735..4400
DNA (666bp) protein (222aa)
conserved exported protein of unknown function Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Uncharacterized protein id=3089745 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2935_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4437..5207)
DNA (771bp) protein (257aa)
exopolysaccharide biosynthesis protein (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
exopolysaccharide biosynthesis protein (EC:3.1.3.48)
Exopolysaccharide biosynthesis protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F266_ACIC5
13_1_40cm_4_scaffold_2935_6
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5223..5594)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZL7_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06552.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain
13_1_40cm_4_scaffold_2935_7
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(5599..5913)
DNA (315bp) protein (105aa)
Putative permease n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AI69_IGNAJ
permease
Tax=BJP_IG2103_Bacteroidetes_37_22
13_1_40cm_4_scaffold_2935_8
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6238..7593
DNA (1356bp) protein (452aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CEQ7_MYXFH
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AEI66128.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
13_1_40cm_4_scaffold_2935_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

7704..8282
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003783031
gmhA_[H]; Phosphoheptose isomerase 1 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
gmhA_[H]; Phosphoheptose isomerase 1
13_1_40cm_4_scaffold_2935_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8602..9048
DNA (447bp) protein (149aa)
Transcriptional regulator, LuxR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMJ7_KORVE
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABF41903.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_1_40cm_4_scaffold_2935_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9186..9596
DNA (411bp) protein (137aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Niabella soli DSM 19437 RepID=H1NMH5_9SPHI
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AHF14698.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
13_1_40cm_4_scaffold_2935_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9679..10227
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D107D
Protein of unknown function DUF4199
Uncharacterized protein {ECO:0000313|EMBL:AHG91670.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2935_13
unknown

Not on your lists

comp(10434..11330)
DNA (897bp) protein (299aa)

This feature has no annotations

13_1_40cm_4_scaffold_2935_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

11567..12526
DNA (960bp) protein (320aa)
Conserved domain protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AD81_CARHZ
nucleoside-diphosphate-sugar epimerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_4_scaffold_2935_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12613..15951)
DNA (3339bp) protein (1113aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI000369D84C
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG93481.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 15 items

View Taxonomy