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13_1_40cm_4_scaffold_5421

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5421_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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2..994
DNA (993bp) protein (331aa)
(Uracil-5)-methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF7_KORVE
(uracil-5)-methyltransferase
13_1_40cm_4_scaffold_5421_2
unknown

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991..1539
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_4_scaffold_5421_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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1560..3650
DNA (2091bp) protein (697aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F224_ACIC5
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
DNA internalization-related competence protein ComEC/Rec2
13_1_40cm_4_scaffold_5421_4
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(3600..4157)
DNA (558bp) protein (186aa)
hypothetical protein id=16847096 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein Tax=RBG_16_Aminicenantes_63_16_curated
S-isoprenylcysteine methyltransferase-like protein
13_1_40cm_4_scaffold_5421_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(4154..5182)
DNA (1029bp) protein (343aa)
ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Lipopolysaccharide heptosyltransferase I n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SR1_SOLUE
lipopolysaccharide heptosyltransferase I
13_1_40cm_4_scaffold_5421_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5175..5669)
DNA (495bp) protein (165aa)
cytidyltransferase-related domain-containing protein id=12555681 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Cytidyltransferase-related enzyme {ECO:0000313|EMBL:CDM65984.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cytidyltransferase-related domain-containing protein
13_1_40cm_4_scaffold_5421_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(5670..6728)
DNA (1059bp) protein (353aa)
hldE; D-beta-D-heptose 7-phosphate kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PfkB domain protein id=4143312 bin=GWF2_Methylomirabilis_70_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribokinase-like domain-containing protein
13_1_40cm_4_scaffold_5421_8
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6725..7294)
DNA (570bp) protein (190aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=CG_Delta_06
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PSR5_DESSD
D,D-heptose 1,7-bisphosphate phosphatase
13_1_40cm_4_scaffold_5421_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7287..8288)
DNA (1002bp) protein (334aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Lipopolysaccharide heptosyltransferase II n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SR3_SOLUE
lipopolysaccharide heptosyltransferase II
13_1_40cm_4_scaffold_5421_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8330..9340)
DNA (1011bp) protein (337aa)
lpxK; Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q433_9BACT
13_1_40cm_4_scaffold_5421_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9337..9585)
DNA (249bp) protein (83aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) id=12555687 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
waaA; 3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curate
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
Displaying 11 items

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