ggKbase home page

13_1_40cm_4_scaffold_11352

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_11352_1
unknown

Not on your lists

3..98
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_4_scaffold_11352_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

409..1368
DNA (960bp) protein (320aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATPase associated with various cellular activities AAA_3 id=4802545 bin=GWC2_Chloroflexi_73_18 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ATPase
13_1_40cm_4_scaffold_11352_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1372..2580
DNA (1209bp) protein (403aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14628693 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_11352_4
unknown

Not on your lists

comp(2763..4661)
DNA (1899bp) protein (633aa)

This feature has no annotations

13_1_40cm_4_scaffold_11352_5
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4969..5301
DNA (333bp) protein (111aa)
YbaK/prolyl-tRNA synthetase associated protein n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MZR8_9ACTO
YbaK/prolyl-tRNA synthetase associated protein {ECO:0000313|EMBL:EIF90265.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
SCE87.16c; hypothetical protein
13_1_40cm_4_scaffold_11352_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5298..5750)
DNA (453bp) protein (151aa)
glyoxalase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003804B4C
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_11352_7
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5752..6309)
DNA (558bp) protein (186aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Serinicoccus profundi RepID=UPI000255E628
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_40cm_4_scaffold_11352_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6281..6610)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYS0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_11352_9
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6664..7512
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003811C87
F420-dependent oxidoreductase {ECO:0000313|EMBL:KJR11725.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
luciferase-like monooxygenase
13_1_40cm_4_scaffold_11352_10
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7509..8033
DNA (525bp) protein (175aa)
chorismate synthase n=1 Tax=Serinicoccus marinus RepID=UPI0003B45D31
Chorismate synthase {ECO:0000313|EMBL:KJK12996.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
13_1_40cm_4_scaffold_11352_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

8303..8785
DNA (483bp) protein (161aa)
type 11 methyltransferase id=24524924 bin=RBG_19FT_COMBO_GAL15_69_19 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
type 11 methyltransferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
type 11 methyltransferase
13_1_40cm_4_scaffold_11352_12
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(8782..10287)
DNA (1506bp) protein (502aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ACZ42342.1}; EC=1.1.1.95 {ECO:0000313|EMBL:ACZ42342.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain AT
D-3-phosphoglycerate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC27_THET1
13_1_40cm_4_scaffold_11352_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10379..11608)
DNA (1230bp) protein (410aa)
Aminotransferase class V n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBU3_THET1
class V aminotransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
class V aminotransferase
13_1_40cm_4_scaffold_11352_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11736..12338
DNA (603bp) protein (201aa)
rpe; d-ribulose-5-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpe; pentose-5-phosphate-3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=1241712 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
ribulose-phosphate 3-epimerase
13_1_40cm_4_scaffold_11352_15
unknown

Not on your lists

12386..12820
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_4_scaffold_11352_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13176..13748)
DNA (573bp) protein (191aa)
RNA polymerase sigma factor FliA n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82S67_NITEU
RNA polymerase sigma-28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
fliA; RNA polymerase sigma-70 factor family protein
13_1_40cm_4_scaffold_11352_17
unknown

Not on your lists

13810..14340
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_4_scaffold_11352_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14971..15498
DNA (528bp) protein (176aa)
allantoate amidohydrolase; K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Amidase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IQI5_AZOC5
amidase
13_1_40cm_4_scaffold_11352_19
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15686..16225
DNA (540bp) protein (180aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT04_RUBXD
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter
Displaying 19 items

View Taxonomy