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13_1_40cm_4_scaffold_29293

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_29293_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2..472
DNA (471bp) protein (157aa)
hemK; protoporphyrinogen oxidase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Release factor glutamine methyltransferase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G409_CHLAD
HemK family modification methylase
13_1_40cm_4_scaffold_29293_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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819..1025
DNA (207bp) protein (69aa)
cspA; cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cold shock protein CspA family protein id=14424909 bin=bin1_lowGC species=Enterococcus durans genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
cold shock protein scoF
13_1_40cm_4_scaffold_29293_3
unknown

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1048..1533
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_4_scaffold_29293_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1530..2120
DNA (591bp) protein (197aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY83_THERP
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Sua5/YciO/YrdC/YwlC family protein
13_1_40cm_4_scaffold_29293_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2117..2608
DNA (492bp) protein (164aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ribose-5-phosphate isomerase (EC:5.3.1.6)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=6 Tax=Clostridium thermocellum RepID=A3DIL8_CLOTH
13_1_40cm_4_scaffold_29293_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2605..3864
DNA (1260bp) protein (420aa)
serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=GLYA_CARHZ
13_1_40cm_4_scaffold_29293_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3882..4493
DNA (612bp) protein (204aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uracil phosphoribosyltransferase id=3063049 bin=GWF2_CPR3_35_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_CPR3_35_18 organism_group=CPR3
upp; uracil phosphoribosyltransferase
13_1_40cm_4_scaffold_29293_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4490..4744)
DNA (255bp) protein (85aa)
Putative gualylate cyclase protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPZ6_NOCSJ
putative gualylate cyclase protein
Putative gualylate cyclase protein {ECO:0000313|EMBL:ABL83881.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain
13_1_40cm_4_scaffold_29293_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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4942..5898
DNA (957bp) protein (319aa)
tagO; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.
UDP-N-acetylglucosamine 2-epimerase; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] id=14628286 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase (EC:2.7.8.-)
13_1_40cm_4_scaffold_29293_10
unknown

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5895..6041
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_4_scaffold_29293_11
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6917..8437
DNA (1521bp) protein (507aa)
Putative acylaminoacyl-peptidase (S9 prolyl oligopeptidase active site domain protein) {ECO:0000313|EMBL:CCH16118.1}; EC=3.4.-.- {ECO:0000313|EMBL:CCH16118.1};; TaxID=1150864 species="Bacteria; Actino
Putative acylaminoacyl-peptidase (S9 prolyl oligopeptidase active site domain protein) n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KX21_9ACTO
acylamino acid-releasing protein
Displaying 11 items

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