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13_1_40cm_4_scaffold_11558

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_11558_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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20..1021
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G4_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_11558_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1069..1995
DNA (927bp) protein (309aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] id=12555457 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Lipoyl synthase
13_1_40cm_4_scaffold_11558_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2007..3005
DNA (999bp) protein (333aa)
pdhA; pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
pdhA; pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D2_GEMAT
13_1_40cm_4_scaffold_11558_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3010..3990
DNA (981bp) protein (327aa)
pdhB; pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pyruvate dehydrogenase E1 component beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D1_GEMAT
Transketolase central region
13_1_40cm_4_scaffold_11558_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3993..5180
DNA (1188bp) protein (396aa)
pdhC; pyruvate dehydrogenase E2 component (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
pdhC; pyruvate dehydrogenase E2 component (EC:2.3.1.12)
Pyruvate dehydrogenase E2 component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D0_GEMAT
13_1_40cm_4_scaffold_11558_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5190..6581
DNA (1392bp) protein (464aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Dihydrolipoyl dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C7_GEMAT
dihydrolipoamide dehydrogenase
13_1_40cm_4_scaffold_11558_7
unknown

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6578..7018
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_4_scaffold_11558_8
unknown

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comp(6994..7392)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_4_scaffold_11558_9

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7662..8312
DNA (651bp) protein (217aa)
Molybdopterin binding protein n=1 Tax=uncultured bacterium F25-01 RepID=I3VIH3_9BACT
Molybdopterin binding protein {ECO:0000313|EMBL:AFK79179.1}; TaxID=1191433 species="Bacteria; environmental samples.;" source="uncultured bacterium F25-01.;"
oxidoreductase molybdopterin binding protein
13_1_40cm_4_scaffold_11558_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8319..9623)
DNA (1305bp) protein (435aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZGV2_TERRK
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
13_1_40cm_4_scaffold_11558_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9690..10619
DNA (930bp) protein (310aa)
TPR repeat protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHJ9_CHLTF
TPR-repeat-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_11558_12
unknown

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10616..10801
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_4_scaffold_11558_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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10830..11603
DNA (774bp) protein (258aa)
gdh1, GDH, legdh1; glutamate dehydrogenase (EC:1.4.1.3) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
glutamate dehydrogenase (EC:1.4.1.3)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00038034E1
Displaying 13 items

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