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13_1_40cm_4_scaffold_18799

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_18799_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2..406)
DNA (405bp) protein (135aa)
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A616_GEMAT
13_1_40cm_4_scaffold_18799_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(408..1157)
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein GAU_0635 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=Y635_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0082 protein yeeN
13_1_40cm_4_scaffold_18799_3
unknown

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1213..1614
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_4_scaffold_18799_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1638..2510)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A618_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_18799_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2518..2889)
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_18799_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2924..3751)
DNA (828bp) protein (276aa)
putative heptosyltransferase (EC:2.4.-.-)
glycosyl transferase n=1 Tax=Desulfovibrio longus RepID=UPI0003B396C6
Uncharacterized protein {ECO:0000313|EMBL:ETW99321.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_1_40cm_4_scaffold_18799_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3940..5523
DNA (1584bp) protein (528aa)
Putative response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A620_GEMAT
putative response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative response regulator
13_1_40cm_4_scaffold_18799_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5524..7326
DNA (1803bp) protein (601aa)
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A621_GEMAT
ABC transporter transmembrane region
13_1_40cm_4_scaffold_18799_9
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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7333..8196
DNA (864bp) protein (288aa)
Putative uncharacterized protein id=2173803 bin=GWE2_Bacteroidetes_42_24 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
13_1_40cm_4_scaffold_18799_10
unknown

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8645..9670
DNA (1026bp) protein (342aa)

This feature has no annotations

13_1_40cm_4_scaffold_18799_11
Pelodictyon luteolum, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(9618..10562)
DNA (945bp) protein (315aa)
Glycosyltransferase n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B1X6_PELLD
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ABB24655.1}; TaxID=319225 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon lu
13_1_40cm_4_scaffold_18799_12
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10628..11401
DNA (774bp) protein (258aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=4091120 bin=GWF2_Syntrophobacterales_56_9 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
type 11 methyltransferase
Tax=BJP_IG2069_Syntrophobacterales_47_18
13_1_40cm_4_scaffold_18799_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11859..12434
DNA (576bp) protein (192aa)
pimB; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase (EC:2.4.1.57)
group 1 glycosyl transferase id=14627092 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_4_scaffold_18799_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12448..12621
DNA (174bp) protein (58aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase {ECO:0000313|EMBL:BAH40163.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH40163.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" sou
Glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACD6_GEMAT
Displaying 14 items

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