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13_1_40cm_4_scaffold_35777

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_35777_1
unknown

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1..198
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_35777_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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241..1389
DNA (1149bp) protein (383aa)
Glutamate-aspartate carrier protein id=1714636 bin=GWB2_Ignavibacteria_35_12 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
gltP; glutamate-aspartate carrier protein; K11102 proton glutamate symport protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
gltP; glutamate-aspartate carrier protein
13_1_40cm_4_scaffold_35777_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1467..2942)
DNA (1476bp) protein (492aa)
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amino acid permease-associated region id=3114221 bin=GWA2_Ignavibacteria_55_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative permease
13_1_40cm_4_scaffold_35777_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3016..4782)
DNA (1767bp) protein (589aa)
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
V-type H(+)-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=14425970 bin=bin1_lowGC species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
Pyrophosphate-energized proton pump
13_1_40cm_4_scaffold_35777_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5129..5608)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A972_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39049.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_35777_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5905..6330)
DNA (426bp) protein (142aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A973_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=GWC2_Gemmatimonadetes_71_10_curated
Biopolymer transport protein ExbD/TolR
13_1_40cm_4_scaffold_35777_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6334..6801)
DNA (468bp) protein (156aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A974_GEMAT
putative biopolymer transport protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Biopolymer transport protein ExbD/TolR
13_1_40cm_4_scaffold_35777_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6782..7186)
DNA (405bp) protein (135aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A975_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RBG_16_Gemmatimonadetes_66_8_curated
MotA/TolQ/ExbB proton channel
13_1_40cm_4_scaffold_35777_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7180..7512)
DNA (333bp) protein (111aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A975_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MotA/TolQ/ExbB proton channel
13_1_40cm_4_scaffold_35777_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7540..8127)
DNA (588bp) protein (196aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB family protein
13_1_40cm_4_scaffold_35777_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8370..9401)
DNA (1032bp) protein (344aa)
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB family protein
13_1_40cm_4_scaffold_35777_12
unknown

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comp(9413..9691)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_4_scaffold_35777_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(10210..10389)
DNA (180bp) protein (60aa)
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 13 items

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