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13_1_40cm_4_scaffold_609

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_609_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..285)
DNA (285bp) protein (95aa)
Transcription termination/antitermination protein NusG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N2_GEMAT
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination/antitermination factor NusG
13_1_40cm_4_scaffold_609_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(285..530)
DNA (246bp) protein (82aa)
Protein translocase subunit SecE n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CK53_9ALTE
secE; preprotein translocase SecE subunit; K03073 preprotein translocase subunit SecE Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein translocation complex subunit SecE; K03073 preprotein translocase subunit SecE
13_1_40cm_4_scaffold_609_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(530..682)
DNA (153bp) protein (51aa)
50S ribosomal protein L33 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N0_GEMAT
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L33
13_1_40cm_4_scaffold_609_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(751..1890)
DNA (1140bp) protein (380aa)
Elongation factor Tu n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFTU_GEMAT
tuf; elongation factor Tu; K02358 elongation factor Tu Tax=RBG_16_Gemmatimonadetes_66_8_curated
translation elongation factor Tu
13_1_40cm_4_scaffold_609_trna_4
unknown

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comp(2033..2105)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_609_trna_3
unknown

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comp(2119..2191)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_609_trna_2
unknown

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comp(2204..2286)
DNA (83bp)
transferRNA
13_1_40cm_4_scaffold_609_trna_1
unknown

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comp(2371..2443)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_609_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2530..3957)
DNA (1428bp) protein (476aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cysteine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L7_GEMAT
Cysteinyl-tRNA synthetase
13_1_40cm_4_scaffold_609_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3973..4845)
DNA (873bp) protein (291aa)
Copper transport ATP-binding protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EWK8_MODMB
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Copper transport ATP-binding protein
13_1_40cm_4_scaffold_609_7
unknown

Not on your lists

comp(4852..5523)
DNA (672bp) protein (224aa)

This feature has no annotations

13_1_40cm_4_scaffold_609_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5581..6651)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A2485
protein of unknown function DUF1611
Uncharacterized protein {ECO:0000313|EMBL:AHG90293.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_609_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6648..7739)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ASE2_AZOBR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function UPF0118
13_1_40cm_4_scaffold_609_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7787..8551)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L5_GEMAT
hypothetical protein; K03969 phage shock protein A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_609_11
unknown

Not on your lists

comp(8558..8929)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_4_scaffold_609_12
unknown

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comp(8976..9257)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_4_scaffold_609_13
unknown

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comp(9257..9496)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_4_scaffold_609_14
unknown

Not on your lists

comp(9493..9624)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_4_scaffold_609_15
unknown

Not on your lists

comp(9744..10037)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_4_scaffold_609_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10072..12984)
DNA (2913bp) protein (971aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UvrABC system protein A
13_1_40cm_4_scaffold_609_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13032..13955
DNA (924bp) protein (308aa)
hypothetical protein, partial n=1 Tax=Herbaspirillum lusitanum RepID=UPI000369E5C2
TPR repeat-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_609_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13952..14458
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070008 RepID=L0Q859_9MYCO
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
lppD; Conserved protein of unknown function, putative lipoprotein LppD (part 2)
13_1_40cm_4_scaffold_609_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14455..15957
DNA (1503bp) protein (501aa)
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transglutaminase-like protein id=2535659 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
transglutaminase domain-containing protein
Displaying 23 items

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