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13_1_40cm_4_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 65 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_13_1
unknown

Not on your lists

comp(2..445)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_4_scaffold_13_2
unknown

Not on your lists

499..1083
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_4_scaffold_13_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1070..2143)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJJ6_PSEUX
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_13_4
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2370..3698)
DNA (1329bp) protein (443aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=369723 species="
nicotinate phosphoribosyltransferase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378CE0
13_1_40cm_4_scaffold_13_5
unknown

Not on your lists

3972..4325
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_4_scaffold_13_6
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4267..4779
DNA (513bp) protein (171aa)
allophanate hydrolase n=1 Tax=Methylococcus capsulatus RepID=UPI0002FEC3E5
allophanate hydrolase subunit 1
Allophanate hydrolase, subunit 1 {ECO:0000313|EMBL:AAU90345.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylo
13_1_40cm_4_scaffold_13_7
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5248..5787
DNA (540bp) protein (180aa)
Urea amidolyase related protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBR6_9CHLR
Urea amidolyase related protein {ECO:0000313|EMBL:EFO81368.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source
urea amidolyase
13_1_40cm_4_scaffold_13_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5792..6049)
DNA (258bp) protein (86aa)
Bacterioferritin comigrating protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHT4_9EURY
Bacterioferritin comigrating protein {ECO:0000313|EMBL:EMA43975.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
alkyl hydroperoxide reductase
13_1_40cm_4_scaffold_13_9
unknown

Not on your lists

comp(6134..6274)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_4_scaffold_13_10
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6281..6970)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003675ABE
Uncharacterized protein {ECO:0000313|EMBL:KDN17165.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
13_1_40cm_4_scaffold_13_11
unknown

Not on your lists

7325..7579
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_4_scaffold_13_12
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(7909..8388)
DNA (480bp) protein (160aa)
molybdenum cofactor biosynthesis protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI000364D998
molybdenum cofactor synthesis domain-containing protein Tax=CSP1_4_Chloroflexi
molybdopterin biosynthesis mog protein
13_1_40cm_4_scaffold_13_13
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8385..8828)
DNA (444bp) protein (148aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Z1_CONWI
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RBG_13_Deltaproteobacteria_61_14_curated
molybdenum cofactor biosynthesis protein C
13_1_40cm_4_scaffold_13_14
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

8894..9601
DNA (708bp) protein (236aa)
Hydrolase n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0DZE7_9MICO
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_16_Zixibacteria_53_22_curated
HAD-superfamily hydrolase
13_1_40cm_4_scaffold_13_15
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9633..10586)
DNA (954bp) protein (318aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJQ0_ROSCS
hypothetical protein; K06898 Tax=RBG_13_Actinobacteria_63_9_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
13_1_40cm_4_scaffold_13_16
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(10583..11044)
DNA (462bp) protein (154aa)
hypothetical protein Tax=RBG_16_Chloroflexi_56_11_curated
cbdbA378; hypothetical protein; K09122 hypothetical protein id=1242203 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_13_17

Not on your lists

11089..11343
DNA (255bp) protein (85aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SPL1_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL58097.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
cupin
13_1_40cm_4_scaffold_13_18

Not on your lists

11386..11730
DNA (345bp) protein (115aa)
Marine sediment metagenome DNA, contig: S06H3_C01879 {ECO:0000313|EMBL:GAI01054.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_4_scaffold_13_19
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

11761..12861
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI000382C4AA
cysteine desulfurase NifS Tax=RBG_16_Armatimonadetes_67_12_curated
cysteine desulfurase
13_1_40cm_4_scaffold_13_20
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

12854..13603
DNA (750bp) protein (250aa)
Putative xanthine dehydrogenase accessory factor subfamily, putative n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1F3_THERP
putative xanthine dehydrogenase accessory factor subfamily
Putative xanthine dehydrogenase accessory factor subfamily, putative {ECO:0000313|EMBL:ACM05520.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.
13_1_40cm_4_scaffold_13_21
unknown

Not on your lists

comp(13640..14023)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_4_scaffold_13_22
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14210..14722
DNA (513bp) protein (171aa)
Putative serine/threonine protein kinase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GMH7_9ACTO
Putative serine/threonine protein kinase {ECO:0000313|EMBL:GAB04802.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530
Serine/threonine protein kinase
13_1_40cm_4_scaffold_13_23
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14874..16115)
DNA (1242bp) protein (414aa)
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=CG_Solirubrobact_01
Diaminopimelate decarboxylase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7Y2_AMMDK
diaminopimelate decarboxylase
13_1_40cm_4_scaffold_13_24
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16417..17037
DNA (621bp) protein (207aa)
gidB; methyltransferase GidB (EC:2.1.-.-); K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RBG_16_Gammaproteobacteria_66_13_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CD92_THET1
methyltransferase GidB
13_1_40cm_4_scaffold_13_25
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17056..18135)
DNA (1080bp) protein (360aa)
Phosphate-binding protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTF8_KYRT2
phosphate ABC transporter substrate-binding protein
Phosphate-binding protein {ECO:0000256|PIRNR:PIRNR002756}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 /
13_1_40cm_4_scaffold_13_26
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18352..19296
DNA (945bp) protein (315aa)
phoR2; alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae
Alkaline phosphatase synthesis sensor protein PhoR n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LF58_THEPS
13_1_40cm_4_scaffold_13_27
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

19398..20177
DNA (780bp) protein (260aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RBG_13_Chloroflexi_51_18_curated
Phosphate ABC transporter, ATPase subunit n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1Y4_DEHLB
phosphate ABC transporter ATPase
13_1_40cm_4_scaffold_13_28
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

20246..20851
DNA (606bp) protein (202aa)
Phosphate transport system regulatory protein PhoU id=4428888 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
phoU; phosphate transport system regulatory protein PhoU; K02039 phosphate transport system protein Tax=GWC2_RIF_CHLX_73_18_curated
PhoU homolog
13_1_40cm_4_scaffold_13_29
Dehalogenimonas lykanthroporepellens, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

20848..21621
DNA (774bp) protein (258aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1X5_DEHLB
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADJ26603.1}; TaxID=552811 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas lyk
13_1_40cm_4_scaffold_13_30
R_NC10_66_22, NC10, Bacteria

Not on your lists

21602..22552
DNA (951bp) protein (317aa)
Phosphate transport system permease protein PstC n=1 Tax=uncultured bacterium F25-01 RepID=I3VIF9_9BACT
phosphate ABC transporter inner membrane protein; K02037 phosphate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
phosphate ABC transporter membrane protein
Displaying items 1-30 of 65 in total

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