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13_1_40cm_4_scaffold_157

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_157_1
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(31..1038)
DNA (1008bp) protein (336aa)
TrkA-N domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YUD9_9ZZZZ
TrkA-N domain-containing protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
TrkA-N domain-containing protein
13_1_40cm_4_scaffold_157_2
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1035..1799)
DNA (765bp) protein (255aa)
Putative enoyl-CoA hydratase echA8 {ECO:0000313|EMBL:KJF23854.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJF23854.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococc
enoyl-CoA hydratase n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000372BE72
enoyl-CoA hydratase/isomerase family protein
13_1_40cm_4_scaffold_157_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1810..3204)
DNA (1395bp) protein (465aa)
fumarate lyase; K01679 fumarate hydratase, class II [EC:4.2.1.2] Tax=RBG_16_RIF_CHLX_69_14_curated
fumarate lyase; K01679 fumarate hydratase, class II [EC:4.2.1.2] id=14631501 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
fumarate lyase
13_1_40cm_4_scaffold_157_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

3260..4153
DNA (894bp) protein (298aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] Tax=RBG_16_RIF_CHLX_69_14_curated
Ppx/GppA phosphatase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLU0_9CHLR
ppx; exopolyphosphatase
13_1_40cm_4_scaffold_157_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4191..5180
DNA (990bp) protein (330aa)
Cation diffusion facilitator family transporter n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TS34_9CHLR
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EFH86107.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sou
cation diffusion facilitator family transporter
13_1_40cm_4_scaffold_157_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5116..6807)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E1L4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN12448.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
hypothetical protein
13_1_40cm_4_scaffold_157_7
unknown

Not on your lists

comp(7072..7431)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_4_scaffold_157_8
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7453..9207)
DNA (1755bp) protein (585aa)
AMP-dependent synthetase and ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUI4_9BACT
fadD; Long-chain acyl-CoA synthetase Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
AMP-dependent synthetase and ligase
13_1_40cm_4_scaffold_157_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(9216..9680)
DNA (465bp) protein (155aa)
transcription elongation factor GreA n=1 Tax=Laceyella sacchari RepID=UPI0003B3439C
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transcription elongation factor GreA
13_1_40cm_4_scaffold_157_10
unknown

Not on your lists

9711..10016
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_157_11
unknown

Not on your lists

comp(10009..12192)
DNA (2184bp) protein (728aa)
flp pilus-assembly TadE/G-like family protein
13_1_40cm_4_scaffold_157_12
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(12161..12871)
DNA (711bp) protein (237aa)
TadE family protein Tax=RBG_13_Chloroflexi_48_10_curated
TadE family protein
13_1_40cm_4_scaffold_157_13
unknown

Not on your lists

comp(12868..13401)
DNA (534bp) protein (178aa)
TadE family protein
13_1_40cm_4_scaffold_157_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(13625..14731)
DNA (1107bp) protein (369aa)
hypothetical protein; K07502 hypothetical protein id=14630952 bin=bin9_gal15 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
hypothetical protein; K07502 hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_1_40cm_4_scaffold_157_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14683..16944)
DNA (2262bp) protein (754aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2A0_SPHTD
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACZ38367.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerob
13_1_40cm_4_scaffold_157_16
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17000..17536
DNA (537bp) protein (179aa)
RNA polymerase sigma factor SigM n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RDX8_MYCPH
RNA polymerase sigma factor SigM {ECO:0000313|EMBL:EID09331.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM6
sigma-70 family RNA polymerase sigma factor
13_1_40cm_4_scaffold_157_17
unknown

Not on your lists

17681..18139
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_4_scaffold_157_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(18205..19605)
DNA (1401bp) protein (467aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Putative tRNA synthetases class I (C) catalytic domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10K24 RepID=B3TCG2_9ZZZZ
13_1_40cm_4_scaffold_157_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19618..20622
DNA (1005bp) protein (335aa)
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin binding domain-containing protein id=5010013 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MoeA; molybdopterin biosynthesis enzyme
13_1_40cm_4_scaffold_157_20
unknown

Not on your lists

20619..20915
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_4_scaffold_157_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20915..22297
DNA (1383bp) protein (461aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625321 bin=bin7_NC10_sister species=Smithella sp. ME-1 genus=Smithella taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_157_22
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(22294..22554)
DNA (261bp) protein (87aa)
source missing description 1..42 Tax=CG_Dehalo_02
FmdB family regulatory protein
13_1_40cm_4_scaffold_157_23
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22571..23479
DNA (909bp) protein (303aa)
threonine dehydratase n=1 Tax=Mycobacterium hassiacum RepID=UPI00037C6F0C
Pyridoxal-phosphate dependent enzyme family protein {ECO:0000313|EMBL:EKF21362.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycoba
pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_4_scaffold_157_24
unknown

Not on your lists

comp(23472..24185)
DNA (714bp) protein (238aa)

This feature has no annotations

13_1_40cm_4_scaffold_157_25
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

24206..25801
DNA (1596bp) protein (532aa)
Amidohydrolase family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY45_THERP
amidohydrolase family protein
Amidohydrolase family {ECO:0000313|EMBL:ACM05783.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC
13_1_40cm_4_scaffold_157_26
unknown

Not on your lists

comp(25731..26207)
DNA (477bp) protein (159aa)
plectin
13_1_40cm_4_scaffold_157_27
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26272..26778
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0Q2_CALAS
putative transcriptional regulator Tax=RBG_13_Deltaproteobacteria_65_10_curated
hypothetical protein
13_1_40cm_4_scaffold_157_28
unknown

Not on your lists

comp(27085..27270)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_4_scaffold_157_29
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

27295..28596
DNA (1302bp) protein (434aa)
Glu/Leu/Phe/Val dehydrogenase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKS4_ROSCS
Glu/Leu/Phe/Val dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus c
13_1_40cm_4_scaffold_157_30
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28604..29665
DNA (1062bp) protein (354aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Frankia sp. QA3 RepID=I8QVT6_9ACTO
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABW15481.1}; Flags: Precursor;; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EA
Displaying items 1-30 of 42 in total

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