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13_1_40cm_4_scaffold_267

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_267_1
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(3..1997)
DNA (1995bp) protein (665aa)
Periplasmic component of the Tol biopolymer transport system-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F907_CONWI
Periplasmic component of the Tol biopolymer transport system-like protein
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
13_1_40cm_4_scaffold_267_2
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1994..2551)
DNA (558bp) protein (186aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LD3_SYMTH
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD41513.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacteriu
13_1_40cm_4_scaffold_267_3
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2791..4098
DNA (1308bp) protein (436aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CDX04121.1}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CDX04121.1}
adenylosuccinate lyase n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003677FF5
hypothetical protein
13_1_40cm_4_scaffold_267_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4095..5012
DNA (918bp) protein (306aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EF20_9CHLR
13_1_40cm_4_scaffold_267_5

Not on your lists

5009..5278
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI00036EE855
Marine sediment metagenome DNA, contig: S01H1_L05763 {ECO:0000313|EMBL:GAF67549.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phosphoribosylformylglycinamidine synthase PurS
13_1_40cm_4_scaffold_267_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

5275..5979
DNA (705bp) protein (235aa)
purQ; phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=CG_Dehalo_01
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=PURQ_MOOTA
phosphoribosylformylglycinamidine synthase I
13_1_40cm_4_scaffold_267_7
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

5976..8168
DNA (2193bp) protein (731aa)
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Chloroflexi_68_14_curated
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J723_DESRM
13_1_40cm_4_scaffold_267_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

8172..9617
DNA (1446bp) protein (482aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI000368CE6C
13_1_40cm_4_scaffold_267_9
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

9617..10597
DNA (981bp) protein (327aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RBG_16_Chloroflexi_68_14_curated
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6F4_MYXSD
phosphoribosylaminoimidazole synthetase
13_1_40cm_4_scaffold_267_10
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

10638..11213
DNA (576bp) protein (192aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBZ8_THET1
phosphoribosylglycinamide formyltransferase
13_1_40cm_4_scaffold_267_11
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11185..12711
DNA (1527bp) protein (509aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
IMP cyclohydrolase n=1 Tax=Desulfurispora thermophila RepID=UPI00038116D1
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoana
13_1_40cm_4_scaffold_267_12
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12711..13457
DNA (747bp) protein (249aa)
tryptophan 2,3-dioxygenase (EC:1.13.11.11)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAM
Tryptophan 2,3-dioxygenase n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PYJ1_STANL
13_1_40cm_4_scaffold_267_13
unknown

Not on your lists

13493..13642
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_4_scaffold_267_14
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13655..14596)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI0003797FB0
NADPH:quinone reductase {ECO:0000313|EMBL:KKD03148.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
alcohol dehydrogenase GroES domain protein
13_1_40cm_4_scaffold_267_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14658..16142)
DNA (1485bp) protein (495aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZT8_CONWI
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB49914.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
13_1_40cm_4_scaffold_267_16
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16270..16716
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=1 Tax=Frankia sp. EUN1f RepID=D3D4H7_9ACTO
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFC82171.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
MarR family transcriptional regulator
13_1_40cm_4_scaffold_267_17
Gordonia sp. KTR9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16720..17859)
DNA (1140bp) protein (380aa)
Acetyl-CoA acetyltransferase n=1 Tax=Gordonia sp. KTR9 RepID=J9SRI7_9ACTO
Acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFR50963.1}; TaxID=337191 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. KTR9.;"
13_1_40cm_4_scaffold_267_18
unknown

Not on your lists

comp(17915..18217)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_267_19
unknown

Not on your lists

18522..18824
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_267_20
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(19333..20058)
DNA (726bp) protein (242aa)
Sodium ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ62_9GAMM
ABC transporter related protein {ECO:0000313|EMBL:KKW01876.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
ABC transporter
13_1_40cm_4_scaffold_267_21
unknown

Not on your lists

comp(20066..20401)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_267_22

Not on your lists

20497..21423
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=542511 species="Bac
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=uncultured bacterium HF0500_16O16 RepID=E0XYF5_9BACT
13_1_40cm_4_scaffold_267_23
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

21420..21968
DNA (549bp) protein (183aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S9G6_9ACTO
Tax=BJP_08E140C01_Coriobacteriales_62_12
13_1_40cm_4_scaffold_267_24
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

21958..26286
DNA (4329bp) protein (1443aa)
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_16_Chloroflexi_51_9_curated
Carbamoyl-phosphate synthase large chain n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2A6_SPHTD
carbamoyl-phosphate synthase large subunit
13_1_40cm_4_scaffold_267_25
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26273..27031
DNA (759bp) protein (253aa)
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QMI6_DESB2
dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:ADK86229.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria;
13_1_40cm_4_scaffold_267_26
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27028..27942
DNA (915bp) protein (305aa)
pyrD; oxidoreductase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=GWC2_Pelobacteraceae_58_13_curated
Dihydroorotate dehydrogenase id=4069925 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
dihydroorotate dehydrogenase 1B
13_1_40cm_4_scaffold_267_27
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

27950..28636
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036DCF10
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_40cm_4_scaffold_267_28
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29056..29421
DNA (366bp) protein (122aa)
ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031B7E5A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERF80864.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
ABC-type multidrug transport system, ATPase component
13_1_40cm_4_scaffold_267_29
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

29393..30724
DNA (1332bp) protein (444aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
atm:ANT_09930 hypothetical protein id=1244900 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_267_30
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30725..31198)
DNA (474bp) protein (158aa)
phage tail protein n=1 Tax=Kaistia granuli RepID=UPI000366F9B8
Uncharacterized protein {ECO:0000313|EMBL:EPE96743.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
conserved hypothetical phage tail region family protein
Displaying items 1-30 of 35 in total

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